Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (24) GO Terms (6) Nucleotides (163) Proteins (61) Interactants (319) Wiki
XB-GENEPAGE-485008

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for mmp1 - All

Models - Gene (41)
Models - mRNA (43)
mRNAs (9)
ESTs (48)

Models - Gene (41)

Source Version Model Species
NCBI 10.0 XBXT10g009323 X. tropicalis
NCBI 10.1 XBXL10_1g11030 X. laevis.S
NCBI 10.1 XBXL10_1g8463 X. laevis.L
ENSEMBL 10.0 mmp1 X. tropicalis
JGI 9.1 Xelaev18016263m.g X. laevis.S
JGI 9.1 Xelaev18013828m.g X. laevis.L
Xenbase 9.1 gene4064 X. tropicalis
Xenbase 9.2 gene15705 X. laevis.S
Xenbase 9.2 gene48266 X. laevis.L
ENSEMBL 9.1 mmp1 X. tropicalis
JGI 8.0 Xetrov14010828m.g X. tropicalis
JGI 7.1 Xetro.B01997 X. tropicalis
JGI 7.2 Xelaev16044243m.g X. laevis.S
JGI 6.0 XeXenL6RMv10005571m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000022198 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_119000005 X. tropicalis
JGI 4.1 gw1.119.114.1 X. tropicalis
JGI 4.1 gw1.119.19.1 X. tropicalis
JGI 4.1 gw1.119.252.1 X. tropicalis
JGI 4.1 gw1.119.253.1 X. tropicalis
JGI 4.1 gw1.119.280.1 X. tropicalis
JGI 4.1 e_gw1.119.114.1 X. tropicalis
JGI 4.1 e_gw1.119.19.1 X. tropicalis
JGI 4.1 e_gw1.119.252.1 X. tropicalis
JGI 4.1 e_gw1.119.253.1 X. tropicalis
JGI 4.1 e_gw1.119.280.1 X. tropicalis
JGI 4.1 EAM_15_query X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1190022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190252 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190253 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190280 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1190009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1190022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1190023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1190008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_119000004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_119000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_119000008 X. tropicalis

Models - mRNA (43)

Source Version Model Species
NCBI 10.0 mRNA046062 X. tropicalis
NCBI 10.1 XBmRNA16017 X. laevis.L
NCBI 10.1 XBmRNA20762 X. laevis.S
ENSEMBL 10.0 ENSXETT00000048042 X. tropicalis
JGI 9.1 Xelaev18013828m X. laevis.L
JGI 9.1 Xelaev18016263m X. laevis.S
Xenbase 9.1 rna13271 X. tropicalis
Xenbase 9.2 rna93785 X. laevis.L
Xenbase 9.2 rna45855 X. laevis.S
ENSEMBL 9.1 ENSXETT00000100424 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048042 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064745 X. tropicalis
JGI 8.0 Xetrov14010828m X. tropicalis
JGI 7.1 Xetro.B01997.1 X. tropicalis
JGI 7.2 Xelaev16044243m X. laevis.S
JGI 6.0 XeXenL6RMv10005571m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_119000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048042 X. tropicalis
JGI 4.1 e_gw1.119.114.1 X. tropicalis
JGI 4.1 e_gw1.119.19.1 X. tropicalis
JGI 4.1 e_gw1.119.252.1 X. tropicalis
JGI 4.1 e_gw1.119.253.1 X. tropicalis
JGI 4.1 e_gw1.119.280.1 X. tropicalis
JGI 4.1 gw1.119.114.1 X. tropicalis
JGI 4.1 gw1.119.19.1 X. tropicalis
JGI 4.1 gw1.119.252.1 X. tropicalis
JGI 4.1 gw1.119.253.1 X. tropicalis
JGI 4.1 gw1.119.280.1 X. tropicalis
JGI 4.1 EAM_15_query X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1190022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190252 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190253 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190280 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1190009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1190022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1190023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1190008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_119000004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_119000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_119000008 X. tropicalis

mRNAs (9)

Clone Accession Species Library Anatomy Stage
NM_001030330 X. tropicalis
TNeu066a08 CR760257 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7028342 BC080175 X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7541813 BC161475 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6939778 BC099337 X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5514222 BC084654 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8549313 BC129519 X. laevis.S
NM_001094954 X. laevis.S
XM_018247759 X. laevis.L

ESTs (48)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8966292 EL661592 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8966855 EL659488 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8963898 EL656921 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8961586 EL655549 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8953564 EG655688 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8942965 EG655015 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7541813 CX448423 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7712637 CX970146 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7570864 CX512085 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7720967 CX995576 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7720416 CX995042 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719975 CX983349 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717102 CX978152 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7716453 CX977286 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712038 CX969284 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7709967 CX965453 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas126b18 AL972284 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109l04 AL970594 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA067a18 BX721807 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu139p02 AL789571 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu066a08 AL783641 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7028342 CF781182 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7017383 CF524379 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7720967 CX995575 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7720416 CX995041 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719975 CX983348 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717102 CX978151 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7716453 CX977285 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712637 CX970145 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712038 CX969283 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7709967 CX965452 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7570864 CX512084 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541813 CX448422 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA067a18 BX721808 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu066a08 BX686240 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8543909 EB470966 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8533140 EB468618 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:8541857 EB465058 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
L080 DV034122 5' X. laevis.S Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
XL079l08 BJ064465 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5514222 CF287067 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6939778 CB983807 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6879095 CB207048 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8541857 EC277746 3' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8533140 EC275658 3' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL079l08 BJ082310 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL103p16 BJ075885 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6879095 CB562527 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage