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Summary Expression Gene Literature (457) GO Terms (5) Nucleotides (265) Proteins (30) Interactants (1727) Wiki
XB-GENEPAGE-485219

All tropicalis laevis

Nucleotide sequences for otx2 - All

Models - Gene (22)
Models - mRNA (18)
Unigene Clusters (4)
Gurdon EST Clusters (3)
mRNAs (11)
ESTs (211)

Models - Gene (22)

Source Version Model Species
JGI 9.1 Xelaev18039840m.g laevis.L
JGI 9.1 Xelaev18041108m.g laevis.S
JGI 7.1 Xetro.H01645 tropicalis
JGI 7.2 Xelaev16078478m.g laevis.L
JGI 7.2 Xelaev16009780m.g laevis.S
JGI 6.0 XeXenL6RMv10032830m.g laevis.L
JGI 6.0 XeXenL6RMv10009265m.g laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_680022 tropicalis
ENSEMBL 4.1 ENSXETG00000015687 tropicalis
JGI 4.1 estExt_FilteredModels1.C_680036 tropicalis
JGI 4.1 e_gw1.68.128.1 tropicalis
JGI 4.1 e_gw1.68.190.1 tropicalis
JGI 4.1 e_gw1.68.240.1 tropicalis
JGI 4.1 gw1.68.128.1 tropicalis
JGI 4.1 gw1.68.190.1 tropicalis
JGI 4.1 gw1.68.240.1 tropicalis
JGI 4.1 estExt_Genewise1.C_680128 tropicalis
JGI 4.1 estExt_Genewise1.C_680190 tropicalis
JGI 4.1 estExt_Genewise1.C_680240 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_680052 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_68000008 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_68000054 tropicalis

Models - mRNA (18)

Source Version Model Species
JGI 7.1 Xetro.H01645.2 tropicalis
JGI 7.1 Xetro.H01645.3 tropicalis
JGI 7.1 Xetro.H01645.1 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_680022 tropicalis
ENSEMBL 4.1 ENSXETT00000034219 tropicalis
JGI 4.1 e_gw1.68.128.1 tropicalis
JGI 4.1 e_gw1.68.190.1 tropicalis
JGI 4.1 e_gw1.68.240.1 tropicalis
JGI 4.1 gw1.68.128.1 tropicalis
JGI 4.1 gw1.68.190.1 tropicalis
JGI 4.1 gw1.68.240.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_680036 tropicalis
JGI 4.1 estExt_Genewise1.C_680128 tropicalis
JGI 4.1 estExt_Genewise1.C_680190 tropicalis
JGI 4.1 estExt_Genewise1.C_680240 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_680052 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_68000008 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_68000054 tropicalis

Unigene Clusters (4)

ID Species
Str.10021 tropicalis
Str.40314 tropicalis
Xl.47281 laevis.L
Xl.3004 laevis.S

Gurdon EST Clusters (3)

ID Species
1012074782 tropicalis
1012769450 laevis.L
1012769068 laevis.S

mRNAs (11)

Clone Accession Species Library Anatomy Stage
NM_001016177 tropicalis
TGas114a06 CR761863 tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7624050 BC135884 tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XM_012968372 tropicalis
IMAGE:6632834 BC077357 laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3402294 BC070526 laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
Z46972 laevis.S
U19814 laevis.L
L26509 laevis.S
NM_001091486 laevis.L
NM_001090691 laevis.S

ESTs (211)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8850606 ES685313 5' tropicalis NICHD_XGC_tropEye1 eye frog
IMAGE:8850533 ES685127 5' tropicalis NICHD_XGC_tropEye1 eye frog
IMAGE:8848243 ES681022 5' tropicalis NICHD_XGC_tropEye1 eye frog
IMAGE:8847777 ES679388 5' tropicalis NICHD_XGC_tropEye1 eye frog
IMAGE:8844034 ES674490 5' tropicalis NICHD_XGC_tropEye1 eye frog
TGas025f18 AL629928 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119l09 AL970441 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas035b22 AL654346 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas084e23 AL774566 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas058a24 AL682211 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G12g10 AL643588 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142c13 AL971624 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096d21 AL969562 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114a06 AL965706 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111e19 AL963638 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas081e10 AL777334 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas080d21 AL774862 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7542692 CX450178 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571576 CX512710 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567660 CX508411 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st52g13 DC179585 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38n12 DC176399 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38c21 DC176193 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7520770 CX468569 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524558 CX439281 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527578 CX424542 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576928 CX422179 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553501 CX496183 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546348 CX499632 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556969 CX504716 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu102l05 AL805413 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu125b19 AL795139 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056j13 AL677245 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu013b08 AL643290 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu012n07 AL639745 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA026f06 CR577435 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA017o03 CR420345 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA008f18 CR414285 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA034f09 CR582837 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032a08 CR577929 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7624050 CX401295 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597567 CX386249 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605514 DR894020 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587651 CX313595 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8850606 ES685314 3' tropicalis NICHD_XGC_tropEye1 eye frog
IMAGE:8850533 ES685128 3' tropicalis NICHD_XGC_tropEye1 eye frog
IMAGE:8848243 ES681023 3' tropicalis NICHD_XGC_tropEye1 eye frog
IMAGE:8847777 ES679389 3' tropicalis NICHD_XGC_tropEye1 eye frog
TGas114a06 BX756561 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119l09 BX752988 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas081e10 BX752683 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7542692 CX450177 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst38n12 DC146092 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst38c21 DC145892 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst52g13 DC149292 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7556969 CX504715 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546348 CX499631 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524558 CX439280 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576928 CX422178 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu125b19 BX702143 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102l05 BX694372 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA026f06 CR577436 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA034f09 CR582838 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA017o03 CR420346 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA008f18 CR414286 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7624050 DR899455 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605514 DR894019 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597567 CX386248 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587651 CX313594 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7297854 CO390189 5' laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGp998H078303 BX846894 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998N0214202 BX846483 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6635175 BU909508 5' laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6633006 BU907742 5' laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6632834 BU907609 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3402682 BG363999 5' laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3402294 BG037885 5' laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6865854 CA793802 5' laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
32E7-2 AI031472 5' laevis.L Xenopus neurula plasmid library whole organism NF stage 13
XL026f01 BJ034106 5' laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xl234h01 DC103998 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl311p18 DC126624 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl304b16 DC124271 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl221o24 DC100183 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl246i01 DC107717 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl282o01 DC118352 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl273a17 DC115598 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl316p02 DC128077 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl320m23 DC129237 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL147j10 BJ095054 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL177p16 BJ616720 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169g24 BJ614795 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL167e09 BJ614233 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3748927 BF614580 5' laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XENOPUS_SOURCE_ID:xlnga003c15 AW200443 5' laevis.L normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
XL416h12ex BP674336 5' laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL428o16ex BP678133 5' laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk122p01ex DC042960 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL506o14ex BP703000 5' laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5

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