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Summary Expression Phenotypes Gene Literature (56) GO Terms (92) Nucleotides (105) Proteins (53) Interactants (877) Wiki
XB-GENEPAGE-485651

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hnf1b - All

RefSeq mRNAs(4)
Models - Gene (31)
Models - mRNA (32)
mRNAs (9)
ESTs (17)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002939633 XM_002939633.5 hepatocyte nuclear factor 1-beta isoform X1 3065 bp XP_002939679 X. tropicalis
XM_018091502 XM_018091502.2 hepatocyte nuclear factor 1-beta isoform X2 1899 bp XP_017946991 X. tropicalis
NM_001089811 NM_001089811.1 HNF1 homeobox B L homeolog 2227 bp NP_001083280 X. laevis.L
NM_001087216 NM_001087216.1 hepatocyte nuclear factor 1-beta 2247 bp NP_001080685 X. laevis.S

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g9850 X. laevis.S
NCBI 10.1 XBXL10_1g7007 X. laevis.L
NCBI 10.0 XBXT10g018839 X. tropicalis
ENSEMBL 10.0 hnf1b X. tropicalis
Xenbase 9.2 gene6810 X. laevis.S
Xenbase 9.2 gene16899 X. laevis.L
JGI 9.1 Xelaev18014991m.g X. laevis.S
JGI 9.1 Xelaev18012186m.g X. laevis.L
Xenbase 9.1 gene21811 X. tropicalis
ENSEMBL 9.1 hnf1b X. tropicalis
JGI 8.0 Xetrov14007986m.g X. tropicalis
JGI 7.2 Xelaev16038484m.g X. laevis.L
JGI 7.1 Xetro.A01155 X. tropicalis
JGI 6.0 XeXenL6RMv10031941m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008000 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_512000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_512000029 X. tropicalis
JGI 4.1 e_gw1.512.65.1 X. tropicalis
JGI 4.1 e_gw1.512.66.1 X. tropicalis
JGI 4.1 e_gw1.512.67.1 X. tropicalis
JGI 4.1 gw1.512.65.1 X. tropicalis
JGI 4.1 gw1.512.66.1 X. tropicalis
JGI 4.1 gw1.512.67.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5120021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120067 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5120014 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_512000004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_512000005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5120029 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA18414 X. laevis.S
NCBI 10.1 XBmRNA13114 X. laevis.L
ENSEMBL 10.0 ENSXETT00000017532 X. tropicalis
NCBI 10.0 mRNA093115 X. tropicalis
Xenbase 9.2 rna19925 X. laevis.S
Xenbase 9.2 rna49392 X. laevis.L
Xenbase 9.1 rna44472 X. tropicalis
JGI 9.1 Xelaev18014991m X. laevis.S
JGI 9.1 Xelaev18012186m X. laevis.L
ENSEMBL 9.1 ENSXETT00000065777 X. tropicalis
ENSEMBL 9.1 ENSXETT00000017532 X. tropicalis
JGI 8.0 Xetrov14007986m X. tropicalis
JGI 7.2 Xelaev16038484m X. laevis.L
JGI 7.1 Xetro.A01155.1 X. tropicalis
JGI 6.0 XeXenL6RMv10031941m X. laevis.L
JGI 4.1 estExt_FilteredModels1.C_5120021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5120014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5120029 X. tropicalis
JGI 4.1 e_gw1.512.67.1 X. tropicalis
JGI 4.1 e_gw1.512.66.1 X. tropicalis
JGI 4.1 e_gw1.512.65.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000017532 X. tropicalis
JGI 4.1 gw1.512.67.1 X. tropicalis
JGI 4.1 gw1.512.66.1 X. tropicalis
JGI 4.1 gw1.512.65.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_512000005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_512000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_512000029 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_512000014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120067 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120065 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
TNeu141k07 CR760425 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002939633 X. tropicalis
XM_018091502 X. tropicalis
IMAGE:4031203 BC060009 X. laevis.L
AGL_8C02 DQ096986 X. laevis.L
NM_001089811 X. laevis.L
IMAGE:4959359 BC056024 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087216 X. laevis.S
X76052 X. laevis.S

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu141k07 AL795264 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7747677 DN043425 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7718414 CX981056 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7565289 CX481576 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531167 CX420564 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7747677 DN043424 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7718414 CX981055 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:4785649 BI442696 5' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
XL486b23ex BP698904 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL075p02 BJ062421 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4785934 BI444285 5' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
XL071d22 BJ081309 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4785649 BI443651 3' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
XL486b23ex BP731890 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL019g10 BJ048297 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL061f09 BJ077544 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL075p02 BJ080488 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25