Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (20) GO Terms (96) Nucleotides (114) Proteins (39) Interactants (263) Wiki
XB-GENEPAGE-486248

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ift88 - All

RefSeq mRNAs(4)
Models - Gene (23)
Models - mRNA (31)
mRNAs (4)
ESTs (43)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002937959 XM_002937959.5 intraflagellar transport protein 88 homolog 2832 bp XP_002938005 X. tropicalis
XM_004912065 XM_004912065.4 intraflagellar transport protein 88 homolog 2766 bp XP_004912122 X. tropicalis
XM_018250291 XM_018250291.2 intraflagellar transport protein 88 homolog 2798 bp XP_018105780 X. laevis.S
XM_018250292 XM_018250292.2 intraflagellar transport protein 88 homolog 2758 bp XP_018105781 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g11011 X. laevis.S
NCBI 10.0 XBXT10g013862 X. tropicalis
ENSEMBL 10.0 ift88 X. tropicalis
Xenbase 9.2 gene903 X. laevis.S
JGI 9.1 Xelaev18016239m.g X. laevis.S
Xenbase 9.1 gene8314 X. tropicalis
ENSEMBL 9.1 ift88 X. tropicalis
JGI 7.1 Xetro.B01867 X. tropicalis
JGI 6.0 XeXenL6RMv10049807m.g X. laevis.S
JGI 4.1 estExt_Genewise1.C_3290037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3290026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_329000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_329000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3290006 X. tropicalis
JGI 4.1 e_gw1.329.36.1 X. tropicalis
JGI 4.1 e_gw1.329.37.1 X. tropicalis
JGI 4.1 e_gw1.329.63.1 X. tropicalis
JGI 4.1 gw1.329.36.1 X. tropicalis
JGI 4.1 gw1.329.37.1 X. tropicalis
JGI 4.1 gw1.329.63.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3290019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290036 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA20696 X. laevis.S
ENSEMBL 10.0 ENSXETT00000065441 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083083 X. tropicalis
NCBI 10.0 mRNA068546 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099466 X. tropicalis
Xenbase 9.2 rna2650 X. laevis.S
Xenbase 9.1 rna26864 X. tropicalis
JGI 9.1 Xelaev18016239m X. laevis.S
ENSEMBL 9.1 ENSXETT00000102596 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099466 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096857 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088064 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083083 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065441 X. tropicalis
JGI 7.1 Xetro.B01867.2 X. tropicalis
JGI 7.1 Xetro.B01867.1 X. tropicalis
JGI 6.0 XeXenL6RMv10049807m X. laevis.S
JGI 4.1 e_gw1.329.37.1 X. tropicalis
JGI 4.1 e_gw1.329.36.1 X. tropicalis
JGI 4.1 gw1.329.37.1 X. tropicalis
JGI 4.1 gw1.329.63.1 X. tropicalis
JGI 4.1 gw1.329.36.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_329000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_329000027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3290006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3290019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3290026 X. tropicalis
JGI 4.1 e_gw1.329.63.1 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002937959 X. tropicalis
XM_004912065 X. tropicalis
XM_018250291 X. laevis.S
XM_018250292 X. laevis.S

ESTs (43)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7753722 DN055250 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8919443 EL833095 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7659374 CX839209 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
st47c09 DC178361 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7686647 CX907796 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7738801 DN027377 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7688108 CX910782 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu080g03 AL775893 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7688791 CX911936 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8913254 EL825286 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7695153 CX923195 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8902895 EL799418 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7716358 CX976955 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712680 CX970453 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTbA055k18 CR433991 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA055j11 BX740979 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8952796 EG654596 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7788941 CX334393 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7738801 DN027376 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8902895 EL799419 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst47c09 DC148083 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu080g03 BX695200 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA055j11 BX740980 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7788941 DR905003 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7659374 CX839208 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7686647 CX907795 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688108 CX910781 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688791 CX911935 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695153 CX923194 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7716358 CX976954 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7753722 DN055249 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8913254 EL825287 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919443 EL833096 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
XL036c21 BJ036375 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL056d09 BJ070317 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8320360 DY574476 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
PBX0008A08 AW633462 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0160B06 AW646124 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0138H06 AW644323 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0011C05 AW633715 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL056d09 BJ087349 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL036c21 BJ051594 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl251g09 DC074604 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15