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Summary Expression Gene Literature (568) GO Terms (11) Nucleotides (162) Proteins (57) Interactants (1846) Wiki
XB-GENEPAGE-486770

All tropicalis laevis

Nucleotide sequences for gsc - All

Models - Gene (38)
Models - mRNA (38)
Unigene Clusters (3)
Gurdon EST Clusters (3)
mRNAs (11)
ESTs (64)

Models - Gene (38)

Source Version Model Species
Xenbase 9.2 gene10355 laevis.S
Xenbase 9.2 gene15635 laevis.L
Xenbase 9.1 gene6305 tropicalis
JGI 9.1 Xelaev18041291m.g laevis.S
JGI 9.1 Xelaev18039577m.g laevis.L
JGI 7.2 Xelaev16079935m.g laevis.S
JGI 7.2 Xelaev16050520m.g laevis.L
JGI 7.1 Xetro.H01277 tropicalis
JGI 6.0 XeXenL6RMv10032923m.g laevis.S
JGI 6.0 XeXenL6RMv10023100m.g laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1850033 tropicalis
ENSEMBL 4.1 ENSXETG00000023328 tropicalis
JGI 4.1 e_gw1.185.84.1 tropicalis
JGI 4.1 e_gw1.185.86.1 tropicalis
JGI 4.1 e_gw1.185.87.1 tropicalis
JGI 4.1 gw1.185.84.1 tropicalis
JGI 4.1 gw1.185.86.1 tropicalis
JGI 4.1 gw1.185.87.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1850011 tropicalis
JGI 4.1 estExt_Genewise1.C_1850084 tropicalis
JGI 4.1 estExt_Genewise1.C_1850086 tropicalis
JGI 4.1 estExt_Genewise1.C_1850087 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1850007 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1850008 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1850009 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850034 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850035 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850036 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1850007 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_185000003 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_185000007 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_185000008 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_185000009 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000035 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000036 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000037 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000038 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_185000009 tropicalis

Models - mRNA (38)

Source Version Model Species
Xenbase 9.2 rna45647 laevis.L
Xenbase 9.2 rna30098 laevis.S
JGI 9.1 Xelaev18039577m laevis.L
JGI 9.1 Xelaev18041291m laevis.S
Xenbase 9.1 rna20358 tropicalis
JGI 7.2 Xelaev16050520m laevis.L
JGI 7.2 Xelaev16079935m laevis.S
JGI 7.1 Xetro.H01277.1 tropicalis
JGI 6.0 XeXenL6RMv10023100m laevis.L
JGI 6.0 XeXenL6RMv10032923m laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_1850033 tropicalis
ENSEMBL 4.1 ENSXETT00000050392 tropicalis
JGI 4.1 e_gw1.185.84.1 tropicalis
JGI 4.1 e_gw1.185.86.1 tropicalis
JGI 4.1 e_gw1.185.87.1 tropicalis
JGI 4.1 gw1.185.84.1 tropicalis
JGI 4.1 gw1.185.86.1 tropicalis
JGI 4.1 gw1.185.87.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1850011 tropicalis
JGI 4.1 estExt_Genewise1.C_1850084 tropicalis
JGI 4.1 estExt_Genewise1.C_1850086 tropicalis
JGI 4.1 estExt_Genewise1.C_1850087 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1850007 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1850008 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1850009 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850034 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850035 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850036 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1850007 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_185000003 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_185000007 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_185000008 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_185000009 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000035 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000036 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000037 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000038 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_185000009 tropicalis

Gurdon EST Clusters (3)

ID Species
1012079641 tropicalis
1012773845 laevis.S
1012770519 laevis.L

mRNAs (11)

Clone Accession Species Library Anatomy Stage
gsc-HAR46 CR760138 tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7536652 BC155019 tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9040081 BC170823 tropicalis
IMAGE:9040077 BC170819 tropicalis
NM_001016704 tropicalis
IMAGE:5161842 BC079970 laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
M81481 laevis.S
NM_001087809 laevis.S
XM_018230459 laevis.L
M63872 laevis.L
XM_018231890 laevis.S

ESTs (64)

Clone Accession 5'/3' Species Library Anatomy Stage
gsc-HAR46 BX683248 - tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7545966 CX498990 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541809 CX448394 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536652 CX445267 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7709562 CX964944 5' tropicalis NIH_XGC_tropInt1 intestine frog
xthr25K24 CN104189 5' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20D05 CN102953 5' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
gsc-HAR39 AL965382 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
gsc-HAR43 AL776879 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
gsc-HAR40 AL652832 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
gsc-HAR46 AL777938 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7709562 CX964943 3' tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7545966 CX498989 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541809 CX448393 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536652 CX445266 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr25K24 CN104188 3' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20D05 CN102952 3' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xl234i23 DC104034 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl233p16 DC103855 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl326e01 DC130928 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk64d11ex DC055564 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk4k06ex DC054113 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk59l18ex DC035545 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk138i06ex DC047997 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk3j09ex DC053790 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk101j12ex DC036134 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk148g03ex DC051220 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk7o02ex DC061244 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk6b12ex DC057445 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk114f22ex DC040211 5' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL455b24ex BP687717 5' laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7295674 CO383144 5' laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7300094 CO382720 5' laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGp998D2014214 BX851270 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL217j07 BJ627281 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL177a23 BJ616478 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170j12 BJ615105 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168n12 BJ614635 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL141m17 BJ093225 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL035n04 BJ042478 5' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5161842 CA791308 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6637220 BU911273 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6633528 BU908167 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
rxl326e01 DC095035 3' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl234i23 DC069853 3' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk114f22ex DC007281 3' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk3j09ex DC020415 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk6b12ex DC024030 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk148g03ex DC017878 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk7o02ex DC027754 3' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk59l18ex DC002686 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk77f13ex DC026645 3' laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk4k06ex DC020732 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk138i06ex DC014762 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL429a19ex BP715220 3' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7295674 CO383081 3' laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL217j07 BJ643590 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL177a23 BJ633047 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170j12 BJ631767 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169n12 BJ631585 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168n12 BJ631333 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL141m17 BJ097448 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL035n04 BJ056432 3' laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3475190 BI347939 3' laevis.S Wellcome CRC pcDNAI St10 5 whole organism NF stage 10.5
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