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Summary Expression Gene Literature (54) GO Terms (39) Nucleotides (177) Proteins (44) Interactants (817) Wiki
XB-GENEPAGE-486816

All tropicalis laevis

Nucleotide sequences for irx1 - All

Models - Gene (30)
Models - mRNA (60)
Unigene Clusters (3)
Gurdon EST Clusters (3)
mRNAs (42)
ESTs (174)

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g017080 X. tropicalis
Xenbase 9.1 gene7678 X. tropicalis
JGI 9.1 Xelaev18031340m.g X. laevis.L
Xenbase 9.2 gene15741 X. laevis.L
JGI 9.1 Xelaev18033303m.g X. laevis.S
Xenbase 9.2 gene1998 X. laevis.S
JGI 7.1 Xetro.F01165 X. tropicalis
JGI 7.2 Xelaev16051393m.g X. laevis.L
JGI 7.2 Xelaev16063330m.g X. laevis.S
JGI 6.0 XeXenL6RMv10049921m.g X. laevis.L
JGI 6.0 XeXenL6RMv10051574m.g X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_1310003 X. tropicalis
ENSEMBL 4.1 ENSXETG00000006958 X. tropicalis
JGI 4.1 gw1.131.171.1 X. tropicalis
JGI 4.1 gw1.131.172.1 X. tropicalis
JGI 4.1 gw1.131.5.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1310007 X. tropicalis
JGI 4.1 e_gw1.131.171.1 X. tropicalis
JGI 4.1 e_gw1.131.172.1 X. tropicalis
JGI 4.1 e_gw1.131.5.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310172 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1310003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_131000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_131000003 X. tropicalis

Models - mRNA (60)

Source Version Model Species
NCBI 10.0 mRNA084607 X. tropicalis
NCBI 10.0 mRNA084607 X. tropicalis
JGI 9.1 Xelaev18031340m X. laevis.L
JGI 9.1 Xelaev18033303m X. laevis.S
Xenbase 9.1 rna24719 X. tropicalis
Xenbase 9.2 rna45969 X. laevis.L
Xenbase 9.2 rna5810 X. laevis.S
JGI 9.1 Xelaev18031340m X. laevis.L
JGI 9.1 Xelaev18033303m X. laevis.S
Xenbase 9.1 rna24719 X. tropicalis
Xenbase 9.2 rna45969 X. laevis.L
Xenbase 9.2 rna5810 X. laevis.S
JGI 7.1 Xetro.F01165.1 X. tropicalis
JGI 7.2 Xelaev16051393m X. laevis.L
JGI 7.2 Xelaev16063330m X. laevis.S
JGI 7.1 Xetro.F01165.1 X. tropicalis
JGI 7.2 Xelaev16051393m X. laevis.L
JGI 7.2 Xelaev16063330m X. laevis.S
JGI 6.0 XeXenL6RMv10049921m X. laevis.L
JGI 6.0 XeXenL6RMv10051574m X. laevis.S
JGI 6.0 XeXenL6RMv10049921m X. laevis.L
JGI 6.0 XeXenL6RMv10051574m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_1310003 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015175 X. tropicalis
JGI 4.1 e_gw1.131.171.1 X. tropicalis
JGI 4.1 e_gw1.131.172.1 X. tropicalis
JGI 4.1 e_gw1.131.5.1 X. tropicalis
JGI 4.1 gw1.131.171.1 X. tropicalis
JGI 4.1 gw1.131.172.1 X. tropicalis
JGI 4.1 gw1.131.5.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1310007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310172 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1310003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_131000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_131000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1310003 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015175 X. tropicalis
JGI 4.1 e_gw1.131.171.1 X. tropicalis
JGI 4.1 e_gw1.131.172.1 X. tropicalis
JGI 4.1 e_gw1.131.5.1 X. tropicalis
JGI 4.1 gw1.131.171.1 X. tropicalis
JGI 4.1 gw1.131.172.1 X. tropicalis
JGI 4.1 gw1.131.5.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1310007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1310172 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1310003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1310027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_131000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_131000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_131000003 X. tropicalis

Gurdon EST Clusters (3)

ID Species
1012074080 X. tropicalis
1012772031 X. laevis.L
1012773546 X. laevis.S

mRNAs (42)

Clone Accession Species Library Anatomy Stage
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022p19 CT485750 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799302 BC160569 X. tropicalis NIH_XGC_tropFat1 fat body frog
NM_001201422 X. tropicalis
NM_001201422 X. tropicalis
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982871 BC110767 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
NM_001096688 X. laevis.S
NM_001096688 X. laevis.S
AJ001834 AJ001834 X. laevis.L
AJ001834 AJ001834 X. laevis.L
AJ001834 AJ001834 X. laevis.L
AJ001834 AJ001834 X. laevis.L
NM_001088180 X. laevis.L
NM_001088180 X. laevis.L
IMAGE:9040976 BC169342 X. laevis.L
IMAGE:9040976 BC169342 X. laevis.L
IMAGE:9040976 BC169342 X. laevis.L
IMAGE:9040976 BC169342 X. laevis.L
IMAGE:9040978 BC169344 X. laevis.L
IMAGE:9040978 BC169344 X. laevis.L
IMAGE:9040978 BC169344 X. laevis.L
IMAGE:9040978 BC169344 X. laevis.L

ESTs (174)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
st50d24 DC179100 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st49a12 DC178824 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st72b05 DC184463 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st68p05 DC183672 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st62l13 DC182091 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st39d17 DC176498 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st35k15 DC173487 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st113n08 DC195107 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st113b02 DC194907 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7614632 CX391058 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610797 CX377655 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7545498 CX488322 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544349 CX460669 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540545 CX461851 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566227 CX483377 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7804374 DR840088 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799302 DN060443 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7512895 CX741836