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XB-GENEPAGE-487031
Nucleotide sequences for sox5 - All
RefSeq mRNAs(16) |
Models - Gene (25) |
Models - mRNA (30) |
mRNAs (21) |
ESTs (41) |
RefSeq mRNAs (16)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001128658
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NM_001128658.1 | transcription factor Sox-5 | 2978 bp | NP_001122130 | X. tropicalis |
XM_031897504
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XM_031897504.1 | XP_031753364.1 transcription factor Sox-5 isoform X1 | 3414 bp | XP_031753364 | X. tropicalis |
XM_031897505
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XM_031897505.1 | XP_031753365.1 transcription factor Sox-5 isoform X2 | 2203 bp | XP_031753365 | X. tropicalis |
XM_031897506
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XM_031897506.1 | XP_031753366.1 transcription factor Sox-5 isoform X3 | 2912 bp | XP_031753366 | X. tropicalis |
NM_001174037
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NM_001174037.1 | SRY-box 5 S homeolog | 2552 bp | NP_001167508 | X. laevis.S |
XM_018254025
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XM_018254025.2 | SRY-box 5 S homeolog isoform X1 | 4126 bp | XP_018109514 | X. laevis.S |
XM_018254026
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XM_018254026.2 | SRY-box 5 S homeolog isoform X2 | 4097 bp | XP_018109515 | X. laevis.S |
XM_018254027
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XM_018254027.2 | SRY-box 5 S homeolog isoform X4 | 3642 bp | XP_018109516 | X. laevis.S |
XM_041587485
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XM_041587485.1 | XP_041443419.1 SRY-box 5 S homeolog isoform X3 | 3981 bp | XP_041443419 | X. laevis.S |
XM_041587486
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XM_041587486.1 | XP_041443420.1 SRY-box 5 S homeolog isoform X5 | 3481 bp | XP_041443420 | X. laevis.S |
XM_041587487
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XM_041587487.1 | XP_041443421.1 SRY-box 5 S homeolog isoform X6 | 3512 bp | XP_041443421 | X. laevis.S |
XM_018251830
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XM_018251830.2 | transcription factor Sox-5-like isoform X1 | 4519 bp | XP_018107319 | X. laevis.L |
XM_018251831
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XM_018251831.2 | transcription factor Sox-5-like isoform X2 | 4489 bp | XP_018107320 | X. laevis.L |
XM_018251832
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XM_018251832.2 | transcription factor Sox-5-like isoform X4 | 2206 bp | XP_018107321 | X. laevis.L |
XM_018251834
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XM_018251834.2 | transcription factor Sox-5-like isoform X5 | 4308 bp | XP_018107323 | X. laevis.L |
XM_041585795
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XM_041585795.1 | XP_041441729.1 transcription factor Sox-5-like isoform X3 | 4432 bp | XP_041441729 | X. laevis.L |
Models - Gene (25)
Source | Version | Model | Species |
NCBI | 10.1 |
XBXL10_1g14948
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X. laevis.S |
NCBI | 10.1 |
XBXL10_1g11362
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X. laevis.L |
NCBI | 10.0 |
XBXT10g003645
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X. tropicalis |
ENSEMBL | 10.0 |
sox5
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X. tropicalis |
Xenbase | 9.2 |
gene42512
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X. laevis.S |
Xenbase | 9.2 |
gene39640
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X. laevis.L |
JGI | 9.1 |
Xelaev18019705m.g
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X. laevis.S |
JGI | 9.1 |
Xelaev18016612m.g
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X. laevis.L |
Xenbase | 9.1 |
gene28731
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X. tropicalis |
ENSEMBL | 9.1 |
sox5
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X. tropicalis |
JGI | 7.2 |
Xelaev16069287m.g
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X. laevis.S |
JGI | 7.1 |
Xetro.K02239
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10017467m.g
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X. laevis.S |
ENSEMBL | 4.1 |
ENSXETG00000026458
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X. tropicalis |
JGI | 4.1 |
TIM_1004485456
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X. tropicalis |
JGI | 4.1 |
gw1.1126.27.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.3.1
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_1126000002
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.21.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.20.1
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X. tropicalis |
JGI | 4.1 |
gw1.1126.3.1
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X. tropicalis |
JGI | 4.1 |
gw1.1126.21.1
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X. tropicalis |
JGI | 4.1 |
gw1.1126.20.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.27.1
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_1126000001
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X. tropicalis |
mRNAs based on gene models(30)
Source | Version | Model | Species |
NCBI | 10.1 |
XBmRNA21350
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X. laevis.L |
NCBI | 10.1 |
XBmRNA27818
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X. laevis.S |
NCBI | 10.0 |
mRNA018431
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000055793
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000100581
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000107892
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000109088
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X. tropicalis |
Xenbase | 9.2 |
rna85454
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X. laevis.S |
Xenbase | 9.2 |
rna81290
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X. laevis.L |
Xenbase | 9.1 |
rna55583
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X. tropicalis |
JGI | 9.1 |
Xelaev18016612m
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X. laevis.L |
JGI | 9.1 |
Xelaev18019705m
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X. laevis.S |
ENSEMBL | 9.1 |
ENSXETT00000100581
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000055793
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X. tropicalis |
JGI | 7.2 |
Xelaev16069287m
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X. laevis.S |
JGI | 7.1 |
Xetro.K02239.1
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X. tropicalis |
JGI | 7.1 |
Xetro.K02239.2
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10017467m
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X. laevis.S |
JGI | 4.1 |
gw1.1126.21.1
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X. tropicalis |
JGI | 4.1 |
gw1.1126.27.1
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X. tropicalis |
JGI | 4.1 |
gw1.1126.3.1
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X. tropicalis |
JGI | 4.1 |
TIM_1004485456
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X. tropicalis |
JGI | 4.1 |
gw1.1126.20.1
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_1126000001
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_1126000002
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.27.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.3.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.21.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.1126.20.1
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X. tropicalis |
ENSEMBL | 4.1 |
ENSXETT00000055793
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X. tropicalis |
mRNAs from cDNA libraries (21)
Clone | Accession | Species | Library | Anatomy | Stage |
IMAGE:7604115 |
BC167694
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X. tropicalis | NIH_XGC_tropTad5 | whole organism | NF stage 35 and 36 to NF stage 41 |
THdA019c19 |
CU075480
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X. tropicalis | XGC-tailbud-head | head | NF stage 28 to NF stage 29 and 30 |
NM_001128658
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X. tropicalis | ||||
XM_031897504
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X. tropicalis | ||||
XM_031897505
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X. tropicalis | ||||
XM_031897506
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X. tropicalis | ||||
AB682776
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X. laevis.S | ||||
IMAGE:7974690 |
BC142559
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X. laevis.S | NICHD_XGC_Emb9 | whole organism | NF stage 17 to NF stage 19 |
NM_001174037
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X. laevis.S | ||||
X65653 |
X65653
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X. laevis.S | |||
XM_018254025
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X. laevis.S | ||||
XM_018254026
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X. laevis.S | ||||
XM_018254027
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X. laevis.S | ||||
XM_041587485
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X. laevis.S | ||||
XM_041587486
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X. laevis.S | ||||
XM_041587487
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X. laevis.S | ||||
XM_018251830
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X. laevis.L | ||||
XM_018251831
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X. laevis.L | ||||
XM_018251832
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X. laevis.L | ||||
XM_018251834
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X. laevis.L | ||||
XM_041585795
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X. laevis.L |