Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (13) GO Terms (13) Nucleotides (85) Proteins (49) Interactants (224) Wiki
XB-GENEPAGE-488139

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ocm1 - All

RefSeq mRNAs(8)
Models - Gene (30)
Models - mRNA (34)
mRNAs (8)
ESTs (6)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
XM_002931951 XM_002931951.2 oncomodulin-1 644 bp XP_002931997 X. tropicalis
XM_031893685 XM_031893685.1 XP_031749545.1 oncomodulin-1 753 bp XP_031749545 X. tropicalis
XM_031893686 XM_031893686.1 XP_031749546.1 oncomodulin-1 579 bp XP_031749546 X. tropicalis
XM_018236425 XM_018236425.2 parvalbumin, thymic CPV3 671 bp XP_018091914 X. laevis.L
XM_041576975 XM_041576975.1 XP_041432909.1 parvalbumin, thymic CPV3 706 bp XP_041432909 X. laevis.L
XM_041576976 XM_041576976.1 XP_041432910.1 parvalbumin, thymic CPV3 639 bp XP_041432910 X. laevis.L
XM_041576977 XM_041576977.1 XP_041432911.1 parvalbumin, thymic CPV3 603 bp XP_041432911 X. laevis.L
XM_018239177 XM_018239177.2 parvalbumin, thymic CPV3 597 bp XP_018094666 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g41195 X. laevis.L
NCBI 10.1 XBXL10_1g43900 X. laevis.S
NCBI 10.0 XBXT10g010400 X. tropicalis
ENSEMBL 10.0 ocm1 X. tropicalis
Xenbase 9.2 gene46653 X. laevis.L
Xenbase 9.2 gene50093 X. laevis.S
JGI 9.1 Xelaev18047612m.g X. laevis.S
JGI 9.1 Xelaev18045311m.g X. laevis.L
Xenbase 9.1 gene31657 X. tropicalis
ENSEMBL 9.1 ocm X. tropicalis
JGI 7.1 Xetro.I01295 X. tropicalis
JGI 6.0 XeXenL6RMv10032945m.g X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_140062 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_140008 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_14000008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_140061 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_14000062 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_14000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_14000061 X. tropicalis
JGI 4.1 gw1.14.187.1 X. tropicalis
JGI 4.1 gw1.14.408.1 X. tropicalis
JGI 4.1 gw1.14.410.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_140033 X. tropicalis
JGI 4.1 e_gw1.14.187.1 X. tropicalis
JGI 4.1 e_gw1.14.408.1 X. tropicalis
JGI 4.1 e_gw1.14.410.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140185 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140403 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140405 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_140008 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA82617 X. laevis.S
NCBI 10.1 XBmRNA77736 X. laevis.L
ENSEMBL 10.0 ENSXETT00000118742 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109839 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064036 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119022 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118322 X. tropicalis
NCBI 10.0 mRNA051444 X. tropicalis
Xenbase 9.2 rna96394 X. laevis.S
Xenbase 9.2 rna91515 X. laevis.L
Xenbase 9.1 rna60107 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064036 X. tropicalis
JGI 9.1 Xelaev18047612m X. laevis.S
JGI 9.1 Xelaev18045311m X. laevis.L
JGI 7.1 Xetro.I01295.1 X. tropicalis
JGI 6.0 XeXenL6RMv10032945m X. laevis.S
JGI 4.1 gw1.14.408.1 X. tropicalis
JGI 4.1 gw1.14.410.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_14000008 X. tropicalis
JGI 4.1 e_gw1.14.408.1 X. tropicalis
JGI 4.1 e_gw1.14.410.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_140008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_140061 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_140062 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_140008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_140033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140185 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140403 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140405 X. tropicalis
JGI 4.1 e_gw1.14.187.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_14000061 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_14000062 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_14000008 X. tropicalis
JGI 4.1 gw1.14.187.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
XM_002931951 X. tropicalis
XM_031893685 X. tropicalis
XM_031893686 X. tropicalis
XM_018236425 X. laevis.L
XM_041576975 X. laevis.L
XM_041576976 X. laevis.L
XM_041576977 X. laevis.L
XM_018239177 X. laevis.S

ESTs (6)

Clone Accession 5'/3' Species Library Anatomy Stage
xthr35B17 CN110513 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr37B11 CN111711 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7798085 DR886099 5' X. tropicalis NIH_XGC_tropMet6 whole organism NF stage 62
xthr35B17 CN110512 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr37B11 CN111710 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7798085 DR886098 3' X. tropicalis NIH_XGC_tropMet6 whole organism NF stage 62