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Summary Expression Phenotypes Gene Literature (88) GO Terms (2) Nucleotides (160) Proteins (68) Interactants (1023) Wiki
XB-GENEPAGE-488221

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ptch1 - All

Models - Gene (28)
Models - mRNA (39)
mRNAs (22)
ESTs (32)

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g014731 X. tropicalis
NCBI 10.1 XBXL10_1g4928 X. laevis.S
NCBI 10.1 XBXL10_1g2154 X. laevis.L
ENSEMBL 10.0 ptch1 X. tropicalis
Xenbase 9.1 gene19854 X. tropicalis
Xenbase 9.2 gene35076 X. laevis.S
Xenbase 9.2 gene17895 X. laevis.L
ENSEMBL 9.1 ptch1 X. tropicalis
JGI 8.0 Xetrov14002507m.g X. tropicalis
JGI 7.1 Xetro.A01614 X. tropicalis
JGI 7.2 Xelaev16043131m.g X. laevis.S
JGI 6.0 XeXenL6RMv10045595m.g X. laevis.S
JGI 6.0 XeXenL6RMv10004785m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014834 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1220051 X. tropicalis
JGI 4.1 gw1.122.1.1 X. tropicalis
JGI 4.1 gw1.122.91.1 X. tropicalis
JGI 4.1 gw1.122.93.1 X. tropicalis
JGI 4.1 e_gw1.122.1.1 X. tropicalis
JGI 4.1 e_gw1.122.91.1 X. tropicalis
JGI 4.1 e_gw1.122.93.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1220027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1220001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1220091 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1220093 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1220015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_122000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_122000015 X. tropicalis

Models - mRNA (39)

Source Version Model Species
NCBI 10.0 mRNA072819 X. tropicalis
NCBI 10.1 XBmRNA3956 X. laevis.L
NCBI 10.1 XBmRNA9217 X. laevis.S
ENSEMBL 10.0 ENSXETT00000032466 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086095 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100323 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098690 X. tropicalis
Xenbase 9.1 rna41282 X. tropicalis
Xenbase 9.2 rna52305 X. laevis.L
Xenbase 9.2 rna74877 X. laevis.S
ENSEMBL 9.1 ENSXETT00000100323 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098690 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084674 X. tropicalis
ENSEMBL 9.1 ENSXETT00000032466 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074845 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086095 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077335 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090923 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100509 X. tropicalis
JGI 8.0 Xetrov14002507m X. tropicalis
JGI 7.1 Xetro.A01614.1 X. tropicalis
JGI 7.2 Xelaev16043131m X. laevis.S
JGI 6.0 XeXenL6RMv10004785m X. laevis.L
JGI 6.0 XeXenL6RMv10045595m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_1220051 X. tropicalis
ENSEMBL 4.1 ENSXETT00000032466 X. tropicalis
JGI 4.1 e_gw1.122.1.1 X. tropicalis
JGI 4.1 e_gw1.122.91.1 X. tropicalis
JGI 4.1 e_gw1.122.93.1 X. tropicalis
JGI 4.1 gw1.122.1.1 X. tropicalis
JGI 4.1 gw1.122.91.1 X. tropicalis
JGI 4.1 gw1.122.93.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1220027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1220001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1220091 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1220093 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1220015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_122000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_122000015 X. tropicalis

mRNAs (22)

Clone Accession Species Library Anatomy Stage
XR_004219665 X. tropicalis
XM_031890959 X. tropicalis
XM_031890958 X. tropicalis
XM_031890957 X. tropicalis
AB037686 X. laevis.S
AF302765 X. laevis.S
AB037687 X. laevis.L
NM_001088613 X. laevis.S
XR_001935404 X. laevis.L
XM_018259136 X. laevis.L
XM_018259127 X. laevis.L
XR_001933032 X. laevis.S
XM_018234343 X. laevis.S
XM_018234339 X. laevis.S
XM_018234336 X. laevis.S
XM_018234330 X. laevis.S
XR_005963614 X. laevis.S
XM_041564552 X. laevis.L
XM_041564545 X. laevis.L
XM_041564538 X. laevis.L
XM_041564531 X. laevis.L
XM_041564528 X. laevis.L

ESTs (32)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8913278 EL825443 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8871401 EL713509 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7635720 CX339644 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7635703 CX339325 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621771 CX342124 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7690306 CX914982 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7651224 CX812995 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650803 CX811744 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644659 CX800840 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7527827 CX424583 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA045c06 CR586364 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040l22 CR577031 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas118o15 AL967002 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090f12 AL966268 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas074f12 AL782418 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA018j08 BX703724 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8913278 EL825444 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8871401 EL713508 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7690306 CX914981 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7635703 DR902145 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7651224 CX812994 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644659 CX800839 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650803 CX811743 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7635720 CX339643 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA045c06 CR586365 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040l22 CR577032 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas090f12 BX764093 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas074f12 BX750355 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA018j08 BX703725 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xlk129a22ex DC044946 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL008p21 BJ041593 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL008p21 BJ056171 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15