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Summary Expression Phenotypes Gene Literature (90) GO Terms (41) Nucleotides (223) Proteins (62) Interactants (342) Wiki
XB-GENEPAGE-488469

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tbp - All

RefSeq mRNAs(5)
Models - Gene (35)
Models - mRNA (40)
mRNAs (12)
ESTs (67)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001016339 NM_001016339.3 TATA-box-binding protein 1679 bp NP_001016339 X. tropicalis
XM_012962993 XM_012962993.3 TATA-box-binding protein isoform X1 1795 bp XP_012818447 X. tropicalis
NM_001095569 NM_001095569.1 TATA-box binding protein S homeolog 1249 bp NP_001089038 X. laevis.S
NM_001090900 NM_001090900.1 TATA-box-binding protein 1638 bp NP_001084369 X. laevis.L
XM_041562131 XM_041562131.1 XP_041418065.1 TATA-box-binding protein isoform X1 2410 bp XP_041418065 X. laevis.L

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g23180 X. laevis.L
NCBI 10.1 XBXL10_1g25259 X. laevis.S
NCBI 10.0 XBXT10g000897 X. tropicalis
ENSEMBL 10.0 tbp X. tropicalis
Xenbase 9.2 gene7569 X. laevis.S
Xenbase 9.2 gene3192 X. laevis.L
JGI 9.1 Xelaev18029020m.g X. laevis.S
JGI 9.1 Xelaev18026772m.g X. laevis.L
Xenbase 9.1 gene67 X. tropicalis
ENSEMBL 9.1 tbp X. tropicalis
JGI 7.2 Xelaev16044996m.g X. laevis.S
JGI 7.2 Xelaev16021274m.g X. laevis.L
JGI 7.1 Xetro.E00974 X. tropicalis
JGI 6.0 XeXenL6RMv10026250m.g X. laevis.S
JGI 6.0 XeXenL6RMv10026250m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008556 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000182 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000183 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000055 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2000041 X. tropicalis
JGI 4.1 e_gw1.2.223.1 X. tropicalis
JGI 4.1 e_gw1.2.487.1 X. tropicalis
JGI 4.1 e_gw1.2.65.1 X. tropicalis
JGI 4.1 gw1.2.223.1 X. tropicalis
JGI 4.1 gw1.2.487.1 X. tropicalis
JGI 4.1 gw1.2.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20090 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20223 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20487 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20180 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20181 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20053 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_2000026 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA43173 X. laevis.L
NCBI 10.1 XBmRNA47146 X. laevis.S
NCBI 10.0 mRNA004510 X. tropicalis
ENSEMBL 10.0 ENSXETT00000018725 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066803 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089879 X. tropicalis
Xenbase 9.2 rna22056 X. laevis.S
Xenbase 9.2 rna9244 X. laevis.L
ENSEMBL 9.1 ENSXETT00000089879 X. tropicalis
Xenbase 9.1 rna199 X. tropicalis
JGI 9.1 Xelaev18026772m X. laevis.L
ENSEMBL 9.1 ENSXETT00000066803 X. tropicalis
ENSEMBL 9.1 ENSXETT00000018725 X. tropicalis
JGI 9.1 Xelaev18029020m X. laevis.S
JGI 7.2 Xelaev16021274m X. laevis.L
JGI 7.2 Xelaev16044996m X. laevis.S
JGI 7.1 Xetro.E00974.1 X. tropicalis
JGI 7.1 Xetro.E00974.2 X. tropicalis
JGI 6.0 XeXenL6RMv10026250m X. laevis.L
JGI 6.0 XeXenL6RMv10026250m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_2000183 X. tropicalis
JGI 4.1 e_gw1.2.487.1 X. tropicalis
JGI 4.1 e_gw1.2.65.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000018725 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_20041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20180 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20181 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_20053 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20090 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20223 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20487 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_2000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000182 X. tropicalis
JGI 4.1 e_gw1.2.223.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_2000055 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_2000026 X. tropicalis
JGI 4.1 gw1.2.223.1 X. tropicalis
JGI 4.1 gw1.2.487.1 X. tropicalis
JGI 4.1 gw1.2.65.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:7790514 BC160510 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:9040436 BC171174 X. tropicalis
IMAGE:9040438 BC171176 X. tropicalis
TEgg042d23 CR761393 X. tropicalis
NM_001016339 X. tropicalis
XM_012962993 X. tropicalis
IMAGE:6324598 BC088819 X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
NM_001095569 X. laevis.S
IMAGE:5085399 BC106644 X. laevis.L
NM_001090900 X. laevis.L
X66033 X. laevis.L
XM_041562131 X. laevis.L

ESTs (67)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7664954 CX850470 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA021e07 CR417658 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7592500 DR890469 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA050j04 CR423304 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7790514 CX324433 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA067h23 CR423534 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu144j23 AL799508 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124k16 AL799904 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAO8202 CX942407 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas017l16 AL629587 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas067e06 AL682379 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas084m21 AL774601 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106g08 AL963722 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA067l10 CR424838 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA013m06 CR409963 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7789054 CX334692 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA011f02 CR412644 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas067e06 BX748856 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7592500 CX326327 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7664954 CX850469 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7790514 DR905633 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA067l10 CR424839 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu124k16 BX697336 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA013m06 CR409964 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011f02 CR412645 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA021e07 CR417659 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA050j04 CR423305 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA067h23 CR423535 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7789054 DR905135 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597483 CX386324 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas106g08 BX756071 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4084021 BG264486 5' X. laevis.L Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:3436361 BF615853 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGp998C188392 BX850625 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
PBX0047A05 AW636467 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0138F01 AW644295 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3378239 BE506283 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323529 CA971948 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6324598 CA972719 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6869202 CA984863 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
PBX0115E03 AW642306 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4783147 BI449859 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5162441 BQ398280 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGp998G2010646 BX844505 5' X. laevis.L Soares NXEG egg unfertilized egg stage
BE025701 BE025701 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3746304 BF427378 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:7297885 CO383747 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6636127 BU910333 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL220c13 BJ628002 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL161g06 BJ612927 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4084020 BG264426 5' X. laevis.L Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
xlk4a12ex DC053936 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk162g02ex DC064848 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3517185 BG346807 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
XL023e04 BJ035484 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4059795 BG038958 3' X. laevis.S Wellcome CRC pCS2+ st19-26 whole organism NF stage 19 to NF stage 26
XL023e04 BJ050105 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk162g02ex DC031313 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk4a12ex DC020558 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3436361 BF610902 3' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL161g06 BJ629427 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL220c13 BJ644285 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
BE026951 BE026951 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
BE026465 BE026465 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:4783147 BI450359 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5162441 BQ398279 3' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:3301736 BF071913 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage