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Summary Expression Phenotypes Gene Literature (1) GO Terms (47) Nucleotides (227) Proteins (68) Interactants (22) Wiki
XB-GENEPAGE-489704

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smg1 - All

RefSeq mRNAs(5)
Models - Gene (42)
Models - mRNA (52)
mRNAs (9)
ESTs (73)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002932221 XM_002932221.5 serine/threonine-protein kinase SMG1 14080 bp XP_002932267 X. tropicalis
NM_001096811 NM_001096811.1 SMG1 phosphatidylinositol 3-kinase-related kinase L homeolog 2966 bp NP_001090280 X. laevis.L
XM_018239116 XM_018239116.2 serine/threonine-protein kinase SMG1 isoform X2 12348 bp XP_018094605 X. laevis.S
XM_041577905 XM_041577905.1 XP_041433839.1 serine/threonine-protein kinase SMG1 isoform X1 12353 bp XP_041433839 X. laevis.S
XM_041577906 XM_041577906.1 XP_041433840.1 serine/threonine-protein kinase SMG1 isoform X3 12484 bp XP_041433840 X. laevis.S

Models - Gene (42)

Source Version Model Species
NCBI 10.1 XBXL10_1g43826 X. laevis.S
NCBI 10.1 XBXL10_1g41113 X. laevis.L
NCBI 10.0 XBXT10g000302 X. tropicalis
ENSEMBL 10.0 smg1 X. tropicalis
Xenbase 9.2 gene40955 X. laevis.S
Xenbase 9.2 gene45656 X. laevis.L
JGI 9.1 Xelaev18047528m.g X. laevis.S
JGI 9.1 Xelaev18045208m.g X. laevis.L
Xenbase 9.1 gene18569 X. tropicalis
ENSEMBL 9.1 smg1 X. tropicalis
JGI 8.0 Xetrov14037905m.g X. tropicalis
JGI 7.2 Xelaev16081378m.g X. laevis.L
JGI 7.1 Xetro.I01198 X. tropicalis
JGI 6.0 XeXenL6RMv10014346m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000002954 X. tropicalis
JGI 4.1 gw1.21.2.1 X. tropicalis
JGI 4.1 gw1.21.215.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210213 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210264 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210276 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_21000004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_21000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_21000030 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_21000009 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_21000006 X. tropicalis
JGI 4.1 e_gw1.21.2.1 X. tropicalis
JGI 4.1 e_gw1.21.215.1 X. tropicalis
JGI 4.1 e_gw1.21.266.1 X. tropicalis
JGI 4.1 e_gw1.21.279.1 X. tropicalis
JGI 4.1 e_gw1.21.300.1 X. tropicalis
JGI 4.1 e_gw1.21.318.1 X. tropicalis
JGI 4.1 e_gw1.21.50.1 X. tropicalis
JGI 4.1 e_gw1.21.51.1 X. tropicalis
JGI 4.1 gw1.21.266.1 X. tropicalis
JGI 4.1 gw1.21.279.1 X. tropicalis
JGI 4.1 gw1.21.300.1 X. tropicalis
JGI 4.1 gw1.21.318.1 X. tropicalis
JGI 4.1 gw1.21.50.1 X. tropicalis
JGI 4.1 gw1.21.51.1 X. tropicalis

mRNAs based on gene models(52)

Source Version Model Species
NCBI 10.1 XBmRNA82492 X. laevis.S
NCBI 10.1 XBmRNA77587 X. laevis.L
ENSEMBL 10.0 ENSXETT00000070711 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102448 X. tropicalis
NCBI 10.0 mRNA001668 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083998 X. tropicalis
Xenbase 9.2 rna83188 X. laevis.S
Xenbase 9.2 rna90146 X. laevis.L
ENSEMBL 9.1 ENSXETT00000061173 X. tropicalis
Xenbase 9.1 rna39336 X. tropicalis
JGI 9.1 Xelaev18047528m X. laevis.S
JGI 9.1 Xelaev18045208m X. laevis.L
ENSEMBL 9.1 ENSXETT00000096007 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084868 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083998 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070711 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061304 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102448 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099366 X. tropicalis
JGI 8.0 Xetrov14037905m X. tropicalis
JGI 7.2 Xelaev16081378m X. laevis.L
JGI 7.1 Xetro.I01198.1 X. tropicalis
JGI 7.1 Xetro.I01198.2 X. tropicalis
JGI 6.0 XeXenL6RMv10014346m X. laevis.L
JGI 4.1 e_gw1.21.279.1 X. tropicalis
JGI 4.1 e_gw1.21.266.1 X. tropicalis
JGI 4.1 e_gw1.21.215.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006451 X. tropicalis
JGI 4.1 e_gw1.21.2.1 X. tropicalis
JGI 4.1 gw1.21.51.1 X. tropicalis
JGI 4.1 gw1.21.50.1 X. tropicalis
JGI 4.1 gw1.21.318.1 X. tropicalis
JGI 4.1 gw1.21.300.1 X. tropicalis
JGI 4.1 gw1.21.279.1 X. tropicalis
JGI 4.1 gw1.21.266.1 X. tropicalis
JGI 4.1 gw1.21.215.1 X. tropicalis
JGI 4.1 gw1.21.2.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_21000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_21000005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_21000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_21000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_21000030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210276 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210264 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210213 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_210002 X. tropicalis
JGI 4.1 e_gw1.21.51.1 X. tropicalis
JGI 4.1 e_gw1.21.50.1 X. tropicalis
JGI 4.1 e_gw1.21.318.1 X. tropicalis
JGI 4.1 e_gw1.21.300.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:7679901 BC161155 X. tropicalis
TGas111l16 CR761587 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_002932221 X. tropicalis
IMAGE:4057748 BC098320 X. laevis.L
NM_001096811 X. laevis.L
IMAGE:5537540 BC043640 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018239116 X. laevis.S
XM_041577905 X. laevis.S
XM_041577906 X. laevis.S

ESTs (73)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7642146 CX796615 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641123 CX794786 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7030206 CF786416 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7791265 CX324873 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632914 CX374127 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631269 CX396540 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:9016753 EL863566 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9015190 EL861835 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8884912 EL841347 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8919249 EL833078 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas119h20 AL973248 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8854004 EL816236 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7751031 DN050296 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7718658 CX981095 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7692546 CX918802 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689777 CX913209 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu029a08 AL650474 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029h14 AL650684 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061f02 AL674079 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084o13 AL779101 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126c23 AL792877 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu138h03 AL796842 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9017375 EL865284 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st8l19 DC175518 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st77n17 DC185953 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7650549 CX811324 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649970 CX810954 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645606 CX802795 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:6981050 CF148691 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7642376 CX797233 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA041c13 CR585716 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7645606 CX802794 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
rst8l19 DC145202 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu061f02 BX684577 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084o13 BX696188 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126c23 BX701587 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7791265 CX324872 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615864 DR896744 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632914 DR901515 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7641123 CX794785 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642146 CX796614 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642376 CX797232 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649970 CX810953 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650549 CX811323 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7689777 CX913208 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692546 CX918801 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7718658 CX981094 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7742873 DN035141 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7751031 DN050295 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8854004 EL816237 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8884912 EL841348 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9016753 EL863567 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL186b17 BJ618683 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL181g22 BJ617600 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4682754 BQ735411 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL079f06 BJ064372 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5537540 BQ732241 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3399643 BE576758 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
za50b04 AW159000 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
XL032i14 BJ042698 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL027e10 BJ041685 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL484m22ex BP698451 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
BG410053 BG410053 5' X. laevis.L Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
XL064o04 BJ060130 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL484h17ex BP698353 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL414j08ex BP673705 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL414j08ex BP711527 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL064o04 BJ092329 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL079f06 BJ082194 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL032i14 BJ056649 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL181g22 BJ634091 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL186b17 BJ635260 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL484h17ex BP731440 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5