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Summary Expression Phenotypes Gene Literature (26) GO Terms (24) Nucleotides (113) Proteins (60) Interactants (334) Wiki
XB-GENEPAGE-491113

Show:     All X. tropicalis X. laevis

Nucleotide sequences for dicer1 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (21)
Models - mRNA (29)
mRNAs (5)
ESTs (9)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001129918 NM_001129918.2 endoribonuclease Dicer 5682 bp NP_001123390 X. tropicalis
XM_031890234 XM_031890234.1 XP_031746094.1 endoribonuclease Dicer isoform X1 12229 bp XP_031746094 X. tropicalis
XM_031890235 XM_031890235.1 XP_031746095.1 endoribonuclease Dicer isoform X1 6344 bp XP_031746095 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g007392 X. tropicalis
ENSEMBL 10.0 dicer1 X. tropicalis
Xenbase 9.1 gene24897 X. tropicalis
ENSEMBL 9.1 dicer1 X. tropicalis
JGI 8.0 Xetrov14034612m.g X. tropicalis
JGI 7.1 Xetro.H01280 X. tropicalis
ENSEMBL 4.1 ENSXETG00000023315 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1850010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850089 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850031 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1850006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000033 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_185000008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850007 X. tropicalis
JGI 4.1 e_gw1.185.6.1 X. tropicalis
JGI 4.1 e_gw1.185.7.1 X. tropicalis
JGI 4.1 e_gw1.185.89.1 X. tropicalis
JGI 4.1 gw1.185.6.1 X. tropicalis
JGI 4.1 gw1.185.7.1 X. tropicalis
JGI 4.1 gw1.185.89.1 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000090471 X. tropicalis
NCBI 10.0 mRNA036640 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096069 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096069 X. tropicalis
ENSEMBL 9.1 ENSXETT00000050382 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071635 X. tropicalis
Xenbase 9.1 rna49457 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072352 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090471 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093061 X. tropicalis
JGI 8.0 Xetrov14034612m X. tropicalis
JGI 7.1 Xetro.H01280.1 X. tropicalis
JGI 7.1 Xetro.H01280.2 X. tropicalis
JGI 7.1 Xetro.H01280.3 X. tropicalis
JGI 4.1 gw1.185.89.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1850010 X. tropicalis
JGI 4.1 e_gw1.185.7.1 X. tropicalis
JGI 4.1 e_gw1.185.89.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050382 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850031 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1850006 X. tropicalis
JGI 4.1 e_gw1.185.6.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850089 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000033 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_185000008 X. tropicalis
JGI 4.1 gw1.185.6.1 X. tropicalis
JGI 4.1 gw1.185.7.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7717421 BC167373 X. tropicalis NIH_XGC_tropInt1 intestine frog
EU338242 X. tropicalis
NM_001129918 X. tropicalis
XM_031890234 X. tropicalis
XM_031890235 X. tropicalis

ESTs (9)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu027d12 AL644406 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082l19 AL780136 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA061d04 CR424211 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7689534 CX913525 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7717421 CX978381 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7689534 CX913524 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7717421 CX978380 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTbA061d04 CR424212 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA032a01 BX740331 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40