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Summary Expression Phenotypes Gene Literature (32) GO Terms (30) Nucleotides (157) Proteins (54) Interactants (133) Wiki
XB-GENEPAGE-491713

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cntn1 - All

RefSeq mRNAs(6)
Models - Gene (27)
Models - mRNA (37)
mRNAs (10)
ESTs (51)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002932811 XM_002932811.5 contactin-1 6024 bp XP_002932857 X. tropicalis
XM_031898958 XM_031898958.1 XP_031754818.1 contactin-1 5929 bp XP_031754818 X. tropicalis
NM_001085869 NM_001085869.1 contactin 1 L homeolog precursor 3218 bp NP_001079338 X. laevis.L
NM_001087736 NM_001087736.1 contactin 1 S homeolog precursor 3210 bp NP_001081205 X. laevis.S
XM_018254107 XM_018254107.2 contactin 1 S homeolog isoform X1 6003 bp XP_018109596 X. laevis.S
XM_041587512 XM_041587512.1 XP_041443446.1 contactin 1 S homeolog isoform X1 5886 bp XP_041443446 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g16195 X. laevis.S
NCBI 10.1 XBXL10_1g12654 X. laevis.L
NCBI 10.0 XBXT10g004492 X. tropicalis
ENSEMBL 10.0 cntn1 X. tropicalis
Xenbase 9.2 gene8129 X. laevis.L
Xenbase 9.2 gene19596 X. laevis.S
JGI 9.1 Xelaev18017612m.g X. laevis.L
JGI 9.1 Xelaev18021109m.g X. laevis.S
Xenbase 9.1 gene7069 X. tropicalis
ENSEMBL 9.1 cntn1 X. tropicalis
JGI 8.0 Xetrov14014528m.g X. tropicalis
JGI 7.2 Xelaev16041085m.g X. laevis.L
JGI 7.1 Xetro.C01792 X. tropicalis
JGI 6.0 XeXenL6RMv10032980m.g X. laevis.L
JGI 6.0 XeXenL6RMv10043414m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000015810 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_360021 X. tropicalis
JGI 4.1 gw1.36.194.1 X. tropicalis
JGI 4.1 gw1.36.180.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_360052 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_36000052 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_360017 X. tropicalis
JGI 4.1 gw1.36.179.1 X. tropicalis
JGI 4.1 e_gw1.36.194.1 X. tropicalis
JGI 4.1 e_gw1.36.180.1 X. tropicalis
JGI 4.1 e_gw1.36.179.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_36000017 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA30387 X. laevis.S
NCBI 10.1 XBmRNA23717 X. laevis.L
ENSEMBL 10.0 ENSXETT00000087102 X. tropicalis
NCBI 10.0 mRNA022357 X. tropicalis
Xenbase 9.2 rna57265 X. laevis.S
Xenbase 9.2 rna23679 X. laevis.L
Xenbase 9.1 rna22817 X. tropicalis
JGI 9.1 Xelaev18021109m X. laevis.S
JGI 9.1 Xelaev18017612m X. laevis.L
ENSEMBL 9.1 ENSXETT00000098946 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093085 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092198 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088954 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087102 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082656 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077068 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073547 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072223 X. tropicalis
ENSEMBL 9.1 ENSXETT00000034475 X. tropicalis
JGI 8.0 Xetrov14014528m X. tropicalis
JGI 7.2 Xelaev16041085m X. laevis.L
JGI 7.1 Xetro.C01792.1 X. tropicalis
JGI 6.0 XeXenL6RMv10032980m X. laevis.L
JGI 6.0 XeXenL6RMv10043414m X. laevis.L
JGI 4.1 gw1.36.180.1 X. tropicalis
JGI 4.1 gw1.36.179.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_36000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_36000052 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_360021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_360017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_360052 X. tropicalis
JGI 4.1 e_gw1.36.194.1 X. tropicalis
JGI 4.1 e_gw1.36.180.1 X. tropicalis
JGI 4.1 e_gw1.36.179.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034475 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034472 X. tropicalis
JGI 4.1 gw1.36.194.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
XM_002932811 X. tropicalis
XM_031898958 X. tropicalis
IMAGE:9093676 BC170294 X. laevis.L
XF3.36 D86505 X. laevis.L
NM_001085869 X. laevis.L
AB015205 X. laevis.S
IMAGE:9041151 BC169517 X. laevis.S
NM_001087736 X. laevis.S
XM_018254107 X. laevis.S
XM_041587512 X. laevis.S

ESTs (51)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7659981 CX840152 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7793410 CX846826 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7793432 CX846984 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7592343 CX326111 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7667855 CX854597 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs14K20 CN078094 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7668617 CX855887 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8862806 EL708414 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7668751 CX874731 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs18K21 CN080552 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7671895 CX880272 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7638996 CX384615 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7673863 CX883631 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs32G10 CN089852 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7694205 CX921845 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8941583 EL632765 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7716234 CX976749 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7805754 DR842074 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7748392 DN045042 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7751250 DN050798 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7637067 DR902808 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7652223 CX814635 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
THdA001a05 CR560779 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7653958 CX823244 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660017 CX840062 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:5381981 BQ527535 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7668617 CX855886 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
THdA001a05 CR560780 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7592343 CX326110 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7638996 CX384614 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5381981 BQ527534 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
xtbs14K20 CN078093 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs18K21 CN080551 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs32G10 CN089851 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7652223 CX814634 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653958 CX823243 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659981 CX840151 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7667855 CX854596 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8862806 EL708413 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7668751 CX874730 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7671895 CX880271 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7673863 CX883630 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7694205 CX921844 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7716234 CX976748 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7748392 DN045041 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7751250 DN050797 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7805754 DR842073 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8941583 EL632764 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:6933744 CB943695 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6933063 CB944933 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6931087 CB943272 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62