Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (35) Nucleotides (144) Proteins (56) Interactants (16) Wiki
XB-GENEPAGE-491919

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hpca - All

RefSeq mRNAs(7)
Models - Gene (34)
Models - mRNA (37)
mRNAs (11)
ESTs (38)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001044471 NM_001044471.1 neuron-specific calcium-binding protein hippocalcin 2417 bp NP_001037936 X. tropicalis
XM_012957127 XM_012957127.3 neuron-specific calcium-binding protein hippocalcin isoform X1 2340 bp XP_012812581 X. tropicalis
NM_001093471 NM_001093471.1 hippocalcin S homeolog 2281 bp NP_001086940 X. laevis.S
XM_018246787 XM_018246787.2 hippocalcin-like protein 1 isoform X1 2385 bp XP_018102276 X. laevis.L
XM_018246788 XM_018246788.2 hippocalcin-like protein 1 isoform X1 2168 bp XP_018102277 X. laevis.L
XM_041582179 XM_041582179.1 XP_041438113.1 hippocalcin-like protein 1 isoform X1 2252 bp XP_041438113 X. laevis.L
XM_041582180 XM_041582180.1 XP_041438114.1 neuron-specific calcium-binding protein hippocalcin isoform X2 2031 bp XP_041438114 X. laevis.L

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g7368 X. laevis.L
NCBI 10.1 XBXL10_1g10152 X. laevis.S
NCBI 10.0 XBXT10g006258 X. tropicalis
ENSEMBL 10.0 hpca X. tropicalis
Xenbase 9.2 gene19416 X. laevis.L
Xenbase 9.2 gene40230 X. laevis.S
JGI 9.1 Xelaev18012606m.g X. laevis.L
JGI 9.1 Xelaev18015271m.g X. laevis.S
Xenbase 9.1 gene4155 X. tropicalis
ENSEMBL 9.1 hpca X. tropicalis
JGI 8.0 Xetrov14008569m.g X. tropicalis
JGI 7.2 Xelaev16019147m.g X. laevis.S
JGI 7.1 Xetro.B00262 X. tropicalis
JGI 6.0 XeXenL6RMv10008990m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000001001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_552000008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5520011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000025 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_552000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000024 X. tropicalis
JGI 4.1 e_gw1.552.30.1 X. tropicalis
JGI 4.1 e_gw1.552.60.1 X. tropicalis
JGI 4.1 e_gw1.552.61.1 X. tropicalis
JGI 4.1 gw1.552.30.1 X. tropicalis
JGI 4.1 gw1.552.60.1 X. tropicalis
JGI 4.1 gw1.552.61.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5520013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5520030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5520060 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5520061 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5520008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5520024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5520025 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_552000007 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA13864 X. laevis.L
NCBI 10.1 XBmRNA18970 X. laevis.S
ENSEMBL 10.0 ENSXETT00000115533 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119555 X. tropicalis
ENSEMBL 10.0 ENSXETT00000002188 X. tropicalis
NCBI 10.0 mRNA030937 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093279 X. tropicalis
Xenbase 9.2 rna56746 X. laevis.L
Xenbase 9.2 rna82134 X. laevis.S
ENSEMBL 9.1 ENSXETT00000002188 X. tropicalis
Xenbase 9.1 rna13582 X. tropicalis
JGI 9.1 Xelaev18015271m X. laevis.S
JGI 9.1 Xelaev18012606m X. laevis.L
JGI 8.0 Xetrov14008569m X. tropicalis
JGI 7.2 Xelaev16019147m X. laevis.S
JGI 7.1 Xetro.B00262.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008990m X. laevis.S
JGI 4.1 gw1.552.30.1 X. tropicalis
JGI 4.1 gw1.552.60.1 X. tropicalis
JGI 4.1 gw1.552.61.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000024 X. tropicalis
JGI 4.1 e_gw1.552.60.1 X. tropicalis
JGI 4.1 e_gw1.552.61.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002188 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5520008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5520024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5520025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5520011 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5520013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5520030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5520060 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5520061 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_552000008 X. tropicalis
JGI 4.1 e_gw1.552.30.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000025 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_552000011 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_552000007 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7618003 BC135480 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TEgg137g12 CR761366 X. tropicalis
NM_001044471 X. tropicalis
XM_012957127 X. tropicalis
IMAGE:5155033 BC077798 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6325343 BC088916 X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
NM_001093471 X. laevis.S
XM_018246787 X. laevis.L
XM_018246788 X. laevis.L
XM_041582179 X. laevis.L
XM_041582180 X. laevis.L

ESTs (38)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7666504 CX852891 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8868776 EL708924 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7790650 CX324394 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7533560 CX434986 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7592808 CX326995 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8886133 EL842652 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7599856 CX344709 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7566859 CX506870 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7618003 CX362430 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7663508 CX847736 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7658409 CX837409 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
THdA028m04 CR567845 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7691855 CX917573 5' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA019d03 CR571912 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7671577 CX879721 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA033o23 BX745160 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8886133 EL842653 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8868776 EL708923 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7533560 CX434985 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566859 CX506869 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA028m04 CR567846 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019d03 CR571913 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA033o23 BX745161 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7790650 CX324393 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592808 CX326994 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7599856 CX344708 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618003 CX362429 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7663508 CX847735 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666504 CX852890 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7691855 CX917572 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7751805 DN051661 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8531582 EB471862 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
za44f02 AW158784 5' X. laevis.S Xenopus EST library brain NF stage 45 to NF stage 66
IMAGE:6325343 CA973234 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:5155033 CA792207 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998K118087 BX846938 5' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:8531582 EC275773 3' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:3301762 BF071930 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage