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Summary Expression Phenotypes Gene Literature (5) GO Terms (23) Nucleotides (236) Proteins (55) Interactants (171) Wiki
XB-GENEPAGE-492019

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rlim - All

RefSeq mRNAs(10)
Models - Gene (27)
Models - mRNA (31)
mRNAs (16)
ESTs (110)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
NM_001016091 NM_001016091.2 E3 ubiquitin-protein ligase RNF12 2478 bp NP_001016091 X. tropicalis
NM_001089256 NM_001089256.1 E3 ubiquitin-protein ligase RNF12-A 3665 bp NP_001082725 X. laevis.S
XM_018231910 XM_018231910.2 E3 ubiquitin-protein ligase RNF12-A isoform X1 3882 bp XP_018087399 X. laevis.S
NM_001090725 NP_001084194.2 E3 ubiquitin-protein ligase RNF12-B 3188 bp NP_001084194 X. laevis.L
NM_001090725 NP_001084194.2 E3 ubiquitin-protein ligase RNF12-B 3188 bp NP_001084194 X. laevis.L
NM_001090725 NM_001090725.2 NP_001084194.2 E3 ubiquitin-protein ligase RNF12-B 3188 bp NP_001084194 X. laevis.L
NM_001090725 NM_001090725.2 NP_001084194.2 E3 ubiquitin-protein ligase RNF12-B 3188 bp NP_001084194 X. laevis.L
NM_001114772 NM_001114772.2 E3 ubiquitin-protein ligase RNF12-B 3147 bp NP_001108244 X. laevis.L
XM_018228516 XM_018228516.2 E3 ubiquitin-protein ligase RNF12-B isoform X1 4494 bp XP_018084005 X. laevis.L
XM_018228517 XM_018228517.2 E3 ubiquitin-protein ligase RNF12-B isoform X2 4487 bp XP_018084006 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g37935 X. laevis.S
NCBI 10.1 XBXL10_1g35056 X. laevis.L
NCBI 10.0 XBXT10g006340 X. tropicalis
ENSEMBL 10.0 rlim X. tropicalis
Xenbase 9.2 gene705 X. laevis.L
Xenbase 9.2 gene12317 X. laevis.S
JGI 9.1 Xelaev18038755m.g X. laevis.L
JGI 9.1 Xelaev18042049m.g X. laevis.S
Xenbase 9.1 gene33478 X. tropicalis
ENSEMBL 9.1 rlim X. tropicalis
JGI 7.2 Xelaev16072282m.g X. laevis.L
JGI 7.2 Xelaev16024647m.g X. laevis.S
JGI 7.1 Xetro.G00002 X. tropicalis
JGI 6.0 XeXenL6RMv10044004m.g X. laevis.L
JGI 6.0 XeXenL6RMv10037800m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004580 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_10000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_10000009 X. tropicalis
JGI 4.1 e_gw1.10.279.1 X. tropicalis
JGI 4.1 gw1.10.280.1 X. tropicalis
JGI 4.1 gw1.10.279.1 X. tropicalis
JGI 4.1 gw1.10.278.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_10000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000075 X. tropicalis
JGI 4.1 e_gw1.10.280.1 X. tropicalis
JGI 4.1 e_gw1.10.278.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000074 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA66205 X. laevis.L
NCBI 10.1 XBmRNA71720 X. laevis.S
ENSEMBL 10.0 ENSXETT00000009953 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100788 X. tropicalis
NCBI 10.0 mRNA031328 X. tropicalis
Xenbase 9.2 rna35799 X. laevis.S
Xenbase 9.2 rna2062 X. laevis.L
Xenbase 9.1 rna63091 X. tropicalis
JGI 9.1 Xelaev18038755m X. laevis.L
JGI 9.1 Xelaev18042049m X. laevis.S
ENSEMBL 9.1 ENSXETT00000100788 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009953 X. tropicalis
JGI 7.2 Xelaev16072282m X. laevis.L
JGI 7.2 Xelaev16024647m X. laevis.S
JGI 7.1 Xetro.G00002.1 X. tropicalis
JGI 7.1 Xetro.G00002.2 X. tropicalis
JGI 6.0 XeXenL6RMv10044004m X. laevis.L
JGI 6.0 XeXenL6RMv10037800m X. laevis.S
ENSEMBL 4.1 ENSXETT00000009953 X. tropicalis
JGI 4.1 gw1.10.279.1 X. tropicalis
JGI 4.1 gw1.10.280.1 X. tropicalis
JGI 4.1 gw1.10.278.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_10000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_10000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000074 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000075 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_10000009 X. tropicalis
JGI 4.1 e_gw1.10.280.1 X. tropicalis
JGI 4.1 e_gw1.10.279.1 X. tropicalis
JGI 4.1 e_gw1.10.278.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009955 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
IMAGE:9040532 BC171269 X. tropicalis
IMAGE:9040534 BC171271 X. tropicalis
TGas054b08 CR762181 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001016091 X. tropicalis
AB114039 X. laevis.S
IMAGE:4174178 BC082339 X. laevis.S
NM_001089256 X. laevis.S
XM_018231910 X. laevis.S
AB114040 X. laevis.L
AB114041 X. laevis.L
IMAGE:9041634 BC169999 X. laevis.L
NM_001090725 X. laevis.L
NM_001090725 X. laevis.L
NM_001114772 X. laevis.L
XM_018228516 X. laevis.L
XM_018228517 X. laevis.L

ESTs (110)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7609648 CX376457 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605806 CX366113 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592345 CX326121 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA022a07 CR584292 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA050a15 CR578305 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA002p21 CR447446 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA044m05 CR427732 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7577229 CX422609 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA035c02 CR426126 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7575889 CX430980 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6979650 CF149548 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7532149 CX432660 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu071d16 AL780659 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7573440 CX436950 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu015i13 AL643519 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu009n08 AL637951 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu006f10 AL635179 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7692536 CX918726 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:4461867 BG815984 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7688262 CX910864 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687313 CX909157 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7513838 CX743601 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TNeu009g13 AL634820 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7551546 CX510942 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552568 CX495358 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544100 CX460273 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537174 CX446205 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525986 CX443510 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas031m19 AL647059 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas036h05 AL648126 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas035b01 AL649294 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas056m03 AL672390 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas054b08 AL672581 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas070c02 AL680726 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057p09 AL682778 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132o22 AL969265 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA035c02 CR426127 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:4440931 BG512662 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4461867 BG816547 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7513838 CX743600 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TGas054p10 BX745736 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas056m03 BX747290 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas070c02 BX749712 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132o22 BX758186 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas101n01 BX762189 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas082e16 BX762705 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577229 CX422608 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575889 CX430979 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532149 CX432659 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573440 CX436949 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537174 CX446204 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544100 CX460272 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552568 CX495357 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551546 CX510941 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu071d16 BX688054 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6992922 CF241646 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTbA044m05 CR427733 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA002p21 CR447447 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA022a07 CR584293 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7592345 CX326120 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605806 CX366112 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609648 CX376456 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7687313 CX909156 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688262 CX910863 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692536 CX918725 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7718418 CX981084 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719407 CX982030 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
XL085i03 BJ066226 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk132b08ex DC045926 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk62b01ex DC054889 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL403e09ex BP682285 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0161F11 AW646253 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0149H05 AW645260 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
zb08g06 AW159845 5' X. laevis.S Xenopus EST library brain NF stage 45 to NF stage 66
PBX0106F11 AW641463 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL104g21 BJ057563 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3748037 BE681139 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
PBX0094F10 AW640392 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL188p17 BJ619373 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0020F05 AW634428 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL430m08ex BP679073 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL450n03ex BP686283 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL467g19ex BP692096 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407d04ex BP696372 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL407d08ex BP696375 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL200o23 BJ622426 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6865266 CA988211 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6634753 BU909162 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3381743 BF047388 5' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380158 BE506964 5' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
xlk116i11ex DC040881 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7981800 DR727359 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4678517 BI477991 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
za34f03 AW158068 5' X. laevis.S Xenopus EST library brain NF stage 45 to NF stage 66
IMAGE:3431782 BG348488 5' X. laevis.S Wellcome CRC pcDNAI egg egg unfertilized egg stage
za45d06 AW158716 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
XL403e09ex BP718624 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL085i03 BJ083548 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3431782 BG038488 3' X. laevis.S Wellcome CRC pcDNAI egg egg unfertilized egg stage