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Summary Expression Gene Literature (8) GO Terms (19) Nucleotides (153) Proteins (26) Interactants (195) Wiki
XB-GENEPAGE-493390

All tropicalis laevis

Nucleotide sequences for smarcal1 - All

Models - Gene (19)
Models - mRNA (18)
Unigene Clusters (2)
Gurdon EST Clusters (2)
mRNAs (6)
ESTs (97)

Models - Gene (19)

Source Version Model Species
Xenbase 9.1 XT-9_1-gene33738 tropicalis
JGI 9.1 Xelaev18044415m.g laevis.L
JGI 8.0 Xetrov14047020m.g tropicalis
JGI 7.1 Xetro.I00049 tropicalis
JGI 7.2 Xelaev16027698m.g laevis.L
JGI 6.0 XeXenL6RMv10043950m.g laevis.L
JGI 4.1 e_gw1.893.17.1 tropicalis
JGI 4.1 e_gw1.893.15.1 tropicalis
JGI 4.1 e_gw1.893.43.1 tropicalis
ENSEMBL 4.1 ENSXETG00000000465 tropicalis
JGI 4.1 gw1.893.15.1 tropicalis
JGI 4.1 gw1.893.17.1 tropicalis
JGI 4.1 gw1.893.43.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_8930001 tropicalis
JGI 4.1 estExt_Genewise1.C_8930017 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8930001 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8930001 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_893000001 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_893000001 tropicalis

Models - mRNA (18)

Source Version Model Species
Xenbase 9.1 rna63584 tropicalis
JGI 8.0 Xetrov14047020m tropicalis
JGI 7.1 Xetro.I00049.1 tropicalis
JGI 4.1 e_gw1.893.17.1 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_893000001 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_893000001 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8930001 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8930001 tropicalis
JGI 4.1 estExt_Genewise1.C_8930017 tropicalis
JGI 4.1 estExt_FilteredModels1.C_8930001 tropicalis
JGI 4.1 gw1.893.43.1 tropicalis
JGI 4.1 gw1.893.17.1 tropicalis
JGI 4.1 gw1.893.15.1 tropicalis
JGI 4.1 e_gw1.893.43.1 tropicalis
JGI 4.1 e_gw1.893.15.1 tropicalis
ENSEMBL 4.1 ENSXETT00000000989 tropicalis
ENSEMBL 4.1 ENSXETT00000000991 tropicalis
ENSEMBL 4.1 ENSXETT00000000990 tropicalis

Unigene Clusters (2)

ID Species
Str.47258 tropicalis
Xl.6594 laevis.L

Gurdon EST Clusters (2)

ID Species
1012071775 tropicalis
1012775319 laevis.L

mRNAs (6)

Clone Accession Species Library Anatomy Stage
NM_001079455 tropicalis
IMAGE:7693054 BC121897 tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6323401 BC100245 laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
NM_001096199 laevis.L
XM_018234595 laevis.L
XM_018234594 laevis.L

ESTs (97)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8890544 EL850542 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8854948 EL817241 5' tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9009033 EL809520 5' tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8957798 EL656506 5' tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8954924 EL655417 5' tropicalis NICHD_XGC_tropInt_62 intestine frog
st64d17 DC182483 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st68f21 DC183534 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st21k16 DC169288 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st99p18 DC192717 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO7827 CX941714 5' tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7579875 CX418824 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577561 CX423235 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544542 CX486442 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAN12220 CX928743 5' tropicalis NIH_XGC_tropTe4 testis frog
CAAN12026 CX928375 5' tropicalis NIH_XGC_tropTe4 testis frog
CAAN11485 CX927367 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7565014 CX481347 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571413 CX512250 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7744704 DN038417 5' tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7695447 CX923964 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695135 CX923423 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695229 CX923413 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694335 CX921742 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693054 CX920061 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692950 CX919997 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692722 CX919379 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692340 CX918687 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691097 CX916230 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691219 CX916075 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689889 CX914029 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686940 CX908527 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686581 CX907662 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7663215 CX845986 5' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7662812 CX845470 5' tropicalis NIH_XGC_tropBrn3 brain frog
TTbA003m03 CR408661 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas144d03 AL972798 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112p08 AL962608 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu123h20 AL802289 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085f14 AL793126 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085f08 AL793123 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas062j20 AL681316 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6981029 CF148025 5' tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8890544 EL850543 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8854948 EL817242 3' tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9009033 EL809521 3' tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst68f21 DC153336 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst64d17 DC152225 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst64c16 DC152204 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst99p18 DC162754 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst21k16 DC139110 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO7827 CX941713 3' tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7577561 CX423234 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAN12220 CX928742 3' tropicalis NIH_XGC_tropTe4 testis frog
CAAN11485 CX927366 3' tropicalis NIH_XGC_tropTe4 testis frog
CAAN12026 CX928374 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695447 CX923963 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695229 CX923412 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694335 CX921741 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693054 CX920060 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692950 CX919996 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692722 CX919378 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692340 CX918686 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691097 CX916229 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691219 CX916074 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689889 CX914028 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686940 CX908526 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686581 CX907661 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7662812 CX845469 3' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7744704 DN038416 3' tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7695135 CX923422 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7663215 CX845985 3' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7571413 CX512249 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544542 CX486441 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565014 CX481346 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579875 CX418823 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA050d04 CR443153 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA002m19 CR409497 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA003m03 CR408662 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas144d03 BX761592 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu123h20 BX702364 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085f14 BX691027 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085f08 BX691021 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGp998F209026 BX842948 5' laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL212d15 BJ625647 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL020e15 BJ033279 5' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL050m08 BJ042135 5' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6932410 CB941399 5' laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6323401 CA971856 5' laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4678162 BI477653 5' laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3746323 BF427517 5' laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0032F03 AW635352 5' laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL212d15 BJ642067 3' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL050m08 BJ055815 3' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL020e15 BJ048574 3' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL002f21 BJ044872 3' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6879513 CB561079 3' laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:4678162 BI445673 3' laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
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