Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (3) GO Terms (0) Nucleotides (214) Proteins (61) Interactants (100) Wiki
XB-GENEPAGE-493785

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for spen - All

Models - Gene (26)
Models - mRNA (30)
mRNAs (20)
ESTs (79)

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g015965 X. tropicalis
NCBI 10.1 XBXL10_1g32290 X. laevis.L
NCBI 10.1 XBXL10_1g34035 X. laevis.S
ENSEMBL 10.0 spen X. tropicalis
JGI 9.1 Xelaev18036386m.g X. laevis.L
JGI 9.1 Xelaev18037964m.g X. laevis.S
Xenbase 9.1 gene15900 X. tropicalis
ENSEMBL 9.1 fam78b X. tropicalis
JGI 7.1 Xetro.K02526 X. tropicalis
JGI 6.0 XeXenL6RMv10021833m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024992 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1080074 X. tropicalis
JGI 4.1 e_gw1.108.137.1 X. tropicalis
JGI 4.1 e_gw1.108.255.1 X. tropicalis
JGI 4.1 e_gw1.108.67.1 X. tropicalis
JGI 4.1 gw1.108.137.1 X. tropicalis
JGI 4.1 gw1.108.255.1 X. tropicalis
JGI 4.1 gw1.108.67.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1080050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080252 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1080020 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_108000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000074 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_108000020 X. tropicalis

Models - mRNA (30)

Source Version Model Species
NCBI 10.0 mRNA078995 X. tropicalis
NCBI 10.1 XBmRNA60827 X. laevis.L
NCBI 10.1 XBmRNA64174 X. laevis.S
ENSEMBL 10.0 ENSXETT00000106945 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124387 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120629 X. tropicalis
JGI 9.1 Xelaev18036386m X. laevis.L
JGI 9.1 Xelaev18037964m X. laevis.S
Xenbase 9.1 rna35202 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080895 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092926 X. tropicalis
ENSEMBL 9.1 ENSXETT00000037795 X. tropicalis
JGI 7.1 Xetro.K02526.1 X. tropicalis
JGI 6.0 XeXenL6RMv10021833m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1080074 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050000 X. tropicalis
JGI 4.1 e_gw1.108.137.1 X. tropicalis
JGI 4.1 e_gw1.108.255.1 X. tropicalis
JGI 4.1 e_gw1.108.67.1 X. tropicalis
JGI 4.1 gw1.108.137.1 X. tropicalis
JGI 4.1 gw1.108.255.1 X. tropicalis
JGI 4.1 gw1.108.67.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1080050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080252 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1080020 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_108000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000074 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_108000020 X. tropicalis

mRNAs (20)

Clone Accession Species Library Anatomy Stage
TGas006k12 CR761643 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001017062 X. tropicalis
XM_004919900 X. tropicalis
XM_004919899 X. tropicalis
XM_004919898 X. tropicalis
XM_031905442 X. tropicalis
XM_018228306 X. laevis.S
XM_018228306 X. laevis.S
XM_018226531 X. laevis.L
XM_018226531 X. laevis.L
XM_018226530 X. laevis.L
XM_018226530 X. laevis.L
XM_018226529 X. laevis.L
XM_018226529 X. laevis.L
XM_018226528 X. laevis.L
XM_018226528 X. laevis.L
XM_018226527 X. laevis.L
XM_018226527 X. laevis.L
XM_041571776 X. laevis.S
XM_041569878 X. laevis.L

ESTs (79)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu072l12 BX683567 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027l06 AL644448 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st66f06 DC183013 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8888062 EL846187 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7570949 CX511680 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568665 CX456946 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543592 CX459728 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545563 CX488110 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7614389 CX390185 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789273 CX334598 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT1238 CX360325 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st1m19 DC168753 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st66e06 DC182999 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7512800 CX741521 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7515488 CX745923 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7640619 CX793262 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7792992 CX814167 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7695475 CX924172 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas139o16 AL972716 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7519558 CX479705 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas018k04 AL629488 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas037m15 AL647592 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032a10 AL648656 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas046b04 AL650237 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102f20 AL958427 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas099m20 AL960999 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu005h01 AL640633 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061l07 AL673936 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053e13 AL675550 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu059j21 AL679553 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas006k12 AL594351 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas006j17 AL595588 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu072l12 AL781748 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu134a16 AL787741 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas038h12 AL651822 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu087k13 AL804900 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7568665 CX456945 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7511509 CX740319 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7511508 CX740395 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7512800 CX741520 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7515488 CX745922 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7640619 CX803201 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas102f20 BX753759 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas139o16 BX764811 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7789273 CX334597 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7614389 CX390184 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7543592 CX459727 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519558 CX479704 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545563 CX488109 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570949 CX511679 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu053e13 BX684387 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061l07 BX684839 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu059j21 BX686567 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078k05 BX686902 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7299916 CO383090 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7296943 CO384490 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL451g09ex BP686487 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7982285 DR716515 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xlk66h21ex DC056311 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk7f22ex DC061073 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4678000 BI314870 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6934522 CB945049 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL052o05 BJ069427 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL142j12 BJ093486 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL171a24 BJ615223 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998J1710552 BX849696 5' X. laevis.L Soares NXEG egg unfertilized egg stage
za44d04 AW158762 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
PBX0026D08 AW634901 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0041G12 AW636024 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3398879 BE576073 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:3402208 BG037869 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3557688 BG578327 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL451g09ex BP722240 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7296943 CO554500 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
rxlk66h21ex DC022885 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4678000 BI443172 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL052o05 BJ086375 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL171a24 BJ631877 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3557688 BG555621 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21