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Summary Expression Gene Literature (56) GO Terms (4) Nucleotides (168) Proteins (36) Interactants (375) Wiki
XB-GENEPAGE-493856

All tropicalis laevis

Nucleotide sequences for prph - All

Models - Gene (26)
Models - mRNA (23)
Unigene Clusters (3)
Gurdon EST Clusters (2)
mRNAs (13)
ESTs (97)

Models - Gene (26)

Source Version Model Species
Xenbase 9.1 gene2957 tropicalis
JGI 9.1 Xelaev18013332m.g laevis.L
JGI 9.1 Xelaev18015840m.g laevis.S
JGI 8.0 Xetrov14009856m.g tropicalis
JGI 7.1 Xetro.B01283 tropicalis
JGI 7.2 Xelaev16014418m.g laevis.L
JGI 6.0 XeXenL6RMv10045219m.g laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1300069 tropicalis
ENSEMBL 4.1 ENSXETG00000011188 tropicalis
JGI 4.1 gw1.130.132.1 tropicalis
JGI 4.1 gw1.130.133.1 tropicalis
JGI 4.1 gw1.130.134.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1300042 tropicalis
JGI 4.1 e_gw1.130.132.1 tropicalis
JGI 4.1 e_gw1.130.133.1 tropicalis
JGI 4.1 e_gw1.130.134.1 tropicalis
JGI 4.1 estExt_Genewise1.C_1300131 tropicalis
JGI 4.1 estExt_Genewise1.C_1300132 tropicalis
JGI 4.1 estExt_Genewise1.C_1300133 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1300022 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1300070 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1300030 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_130000022 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_130000071 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_130000072 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_130000032 tropicalis

Models - mRNA (23)

Source Version Model Species
Xenbase 9.1 rna9683 tropicalis
JGI 8.0 Xetrov14009856m tropicalis
JGI 7.1 Xetro.B01283.1 tropicalis
JGI 7.1 Xetro.B01283.2 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1300069 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_130000032 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_130000072 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_130000071 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_130000022 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1300030 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1300070 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1300022 tropicalis
JGI 4.1 estExt_Genewise1.C_1300133 tropicalis
JGI 4.1 estExt_Genewise1.C_1300132 tropicalis
JGI 4.1 estExt_Genewise1.C_1300131 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1300042 tropicalis
JGI 4.1 gw1.130.134.1 tropicalis
JGI 4.1 gw1.130.133.1 tropicalis
JGI 4.1 gw1.130.132.1 tropicalis
JGI 4.1 e_gw1.130.134.1 tropicalis
JGI 4.1 e_gw1.130.133.1 tropicalis
JGI 4.1 e_gw1.130.132.1 tropicalis
ENSEMBL 4.1 ENSXETT00000024447 tropicalis

Unigene Clusters (3)

ID Species
Str.3242 tropicalis
Str.34760 tropicalis
Xl.27 laevis.L

Gurdon EST Clusters (2)

ID Species
1012075213 tropicalis
1012770813 laevis.L

mRNAs (13)

Clone Accession Species Library Anatomy Stage
NM_001001235 tropicalis
IMAGE:5335951 BC067967 tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5543232 BC045209 laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
X16570 X16570 laevis.L
IMAGE:4959167 BC056020 laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087060 laevis.L
NM_001086386 laevis.S
XM_018244829 laevis.L
XM_018244828 laevis.L
XM_018244827 laevis.L
XM_018248025 laevis.S
XM_018248024 laevis.S
XM_018248023 laevis.S

ESTs (97)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9019650 EL868999 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9014120 EL860658 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013188 EL858860 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890946 EL851315 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8954067 EL656234 5' tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8957532 EL656015 5' tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
xtbs35H10 CN091883 5' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs05D09 CN074688 5' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st98c11 DC192267 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st97c11 DC192022 5' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7791485 CX324809 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788093 CX332854 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626851 CX380046 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7550377 CX486049 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546729 CX500294 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7609683 CX376158 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7563709 CX473637 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7692943 CX919588 5' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7673474 CX883259 5' tropicalis NIH_XGC_tropBrn4 brain frog
THdA025o22 CR567148 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080k15 CR441291 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA054p07 CR438148 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA016k22 CR425277 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr33I14 CN109231 5' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7091397 CK653627 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTpA058c06 BX734549 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA052g06 BX733391 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA058c07 BX726896 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA038a14 BX719909 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu114p13 AL799834 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119n04 AL797238 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu020l17 AL635503 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7029007 CF782161 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:6979110 CF148561 5' tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5335951 BQ521257 5' tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:9014120 EL860659 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013188 EL858861 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8892201 EL852383 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890946 EL851316 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs35H10 CN091882 3' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs05D09 CN074687 3' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst98c11 DC162292 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst97c11 DC162043 3' tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7609683 DR895137 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7692943 CX919587 3' tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7673474 CX883258 3' tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7546729 CX500293 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563709 CX473636 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7626851 CX380045 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788093 CX332853 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7791485 CX324808 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA025o22 CR567149 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080k15 CR441292 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA016k22 CR425278 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7091397 CN323278 3' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7091888 CN319630 3' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr33I14 CN109230 3' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA058c06 BX734550 3' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA052g06 BX733392 3' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu119n04 BX698233 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu114p13 BX689959 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5335951 BQ521256 3' tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xl284e04 DC118698 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl274o12 DC116096 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl309a24 DC125735 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl306b24 DC124907 5' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGp998M2410927 BX853375 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998G2412244 BX852966 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL219l12 BJ627881 5' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL072b01 BJ061131 5' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088i22 BJ066895 5' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL083p23 BJ065734 5' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL079h11 BJ064407 5' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL039p16 BJ037273 5' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL008p16 BJ041589 5' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL042b01 BJ037954 5' laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5440338 CF287795 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5516394 CF286275 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6937095 CD099854 5' laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5543232 BQ736884 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542568 BQ735122 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5543471 BQ733252 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5571337 BQ732757 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4959366 BM180068 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4959167 BM179695 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4202560 BG554359 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
AW765299 AW765299 5' laevis.L Xenopus laevis tadpole stage 24 whole organism NF stage 24
rxl306b24 DC089977 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl284e04 DC083984 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl274o12 DC081162 3' laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL219l12 BJ644167 3' laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL093k22 BJ088656 3' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL053d23 BJ086495 3' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL079h11 BJ082236 3' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL072b01 BJ079328 3' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5440338 CF287794 3' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4202560 BG161683 3' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
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