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Summary Expression Phenotypes Gene Literature (10) GO Terms (42) Nucleotides (169) Proteins (69) Interactants (67) Wiki
XB-GENEPAGE-494684

Show:     All X. tropicalis X. laevis

Nucleotide sequences for drosha - All

RefSeq mRNAs(9)
Models - Gene (23)
Models - mRNA (39)
mRNAs (13)
ESTs (49)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001113680 NM_001113680.1 ribonuclease 3 4320 bp NP_001107152 X. tropicalis
XM_031903195 XM_031903195.1 XP_031759055.1 ribonuclease 3 isoform X1 4419 bp XP_031759055 X. tropicalis
XM_031903197 XM_031903197.1 XP_031759057.1 ribonuclease 3 isoform X1 4320 bp XP_031759057 X. tropicalis
XM_041567650 XM_041567650.1 XP_041423584.1 ribonuclease 3 5732 bp XP_041423584 X. laevis.S
XM_041567651 XM_041567651.1 XP_041423585.1 ribonuclease 3 5719 bp XP_041423585 X. laevis.S
XM_041567652 XM_041567652.1 XP_041423586.1 ribonuclease 3 5656 bp XP_041423586 X. laevis.S
XM_018267704 XM_018267704.2 ribonuclease 3 isoform X1 4399 bp XP_018123193 X. laevis.L
XM_041566246 XM_041566246.1 XP_041422180.1 ribonuclease 3 isoform X2 4291 bp XP_041422180 X. laevis.L
XM_041566247 XM_041566247.1 XP_041422181.1 ribonuclease 3 isoform X3 4367 bp XP_041422181 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g29252 X. laevis.S
NCBI 10.1 XBXL10_1g27533 X. laevis.L
NCBI 10.0 XBXT10g014894 X. tropicalis
ENSEMBL 10.0 drosha X. tropicalis
Xenbase 9.2 gene6822 X. laevis.L
Xenbase 9.2 gene41572 X. laevis.S
JGI 9.1 Xelaev18031527m.g X. laevis.L
JGI 9.1 Xelaev18033471m.g X. laevis.S
Xenbase 9.1 gene32549 X. tropicalis
ENSEMBL 9.1 drosha X. tropicalis
JGI 8.0 Xetrov14026644m.g X. tropicalis
JGI 7.2 Xelaev16062848m.g X. laevis.S
JGI 7.1 Xetro.F00893 X. tropicalis
JGI 6.0 XeXenL6RMv10014563m.g X. laevis.S
JGI 6.0 XeXenL6RMv10025798m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000016701 X. tropicalis
JGI 4.1 C_scaffold_157000001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_157000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_157000008 X. tropicalis
JGI 4.1 gw1.157.42.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_157000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_157000004 X. tropicalis
JGI 4.1 e_gw1.157.42.1 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.1 XBmRNA51634 X. laevis.L
NCBI 10.1 XBmRNA54971 X. laevis.S
ENSEMBL 10.0 ENSXETT00000102455 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085132 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085291 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090206 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071248 X. tropicalis
NCBI 10.0 mRNA073672 X. tropicalis
Xenbase 9.2 rna84064 X. laevis.S
Xenbase 9.2 rna19955 X. laevis.L
JGI 9.1 Xelaev18031527m X. laevis.L
ENSEMBL 9.1 ENSXETT00000085291 X. tropicalis
JGI 9.1 Xelaev18033471m X. laevis.S
ENSEMBL 9.1 ENSXETT00000090206 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096837 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076217 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102455 X. tropicalis
ENSEMBL 9.1 ENSXETT00000036419 X. tropicalis
ENSEMBL 9.1 ENSXETT00000042676 X. tropicalis
Xenbase 9.1 rna61584 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071248 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085132 X. tropicalis
JGI 8.0 Xetrov14026644m X. tropicalis
JGI 7.2 Xelaev16062848m X. laevis.S
JGI 7.1 Xetro.F00893.1 X. tropicalis
JGI 7.1 Xetro.F00893.2 X. tropicalis
JGI 7.1 Xetro.F00893.3 X. tropicalis
JGI 7.1 Xetro.F00893.5 X. tropicalis
JGI 7.1 Xetro.F00893.4 X. tropicalis
JGI 6.0 XeXenL6RMv10025798m X. laevis.S
JGI 6.0 XeXenL6RMv10014563m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_157000008 X. tropicalis
JGI 4.1 e_gw1.157.42.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036419 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_157000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_157000007 X. tropicalis
JGI 4.1 C_scaffold_157000001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_157000001 X. tropicalis
JGI 4.1 gw1.157.42.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7647497 BC121235 X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8916970 BC157520 X. tropicalis NICHD_XGC_tropTe1 testis frog
EU338241 X. tropicalis
NM_001113680 X. tropicalis
XM_031903195 X. tropicalis
XM_031903197 X. tropicalis
IMAGE:6327235 BC092388 X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XM_041567650 X. laevis.S
XM_041567651 X. laevis.S
XM_041567652 X. laevis.S
XM_018267704 X. laevis.L
XM_041566246 X. laevis.L
XM_041566247 X. laevis.L

ESTs (49)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas055e02 AL678107 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas041l22 AL653629 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8905651 EL797584 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8916970 EL830638 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7658006 CX836904 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7648920 CX808969 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647497 CX805684 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7613176 CX388727 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630606 CX370731 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602273 CX365311 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA056l05 CR444845 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7522924 CX472456 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563341 CX467743 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas138g16 AL958192 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas138e14 AL958181 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116j11 AL957287 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas068n13 AL681053 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8916970 EL830639 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8905651 EL797585 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TGas055e02 BX747043 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116j11 BX755880 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas138g16 BX757395 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7563341 CX467742 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522924 CX472455 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA056l05 CR444846 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7630606 CX370730 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613176 CX388726 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7647497 CX805683 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648920 CX808968 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7658006 CX836903 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
XL144h18 BJ094119 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6327235 CA974587 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6872400 CB197516 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:8539734 EB472289 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
XL175k22 BJ616106 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4678864 BI349782 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0068B08 AW638275 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6866812 CA981035 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL154e16 BJ096541 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XENOPUS_SOURCE_ID:xlnoc002e04 AW199607 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:5570984 BQ734578 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL179p08 BJ617242 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL178j19 BJ616886 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL178j19 BJ633405 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL047j18 BJ055140 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL179p08 BJ633733 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL144h18 BJ098086 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL175k22 BJ632691 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XENOPUS_SOURCE_ID:xlnoc002e04 AW198765 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)