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Summary Expression Phenotypes Gene Literature (0) GO Terms (22) Nucleotides (127) Proteins (44) Interactants (0) Wiki
XB-GENEPAGE-5727528

Show:     All X. tropicalis X. laevis

Nucleotide sequences for efcab1 - All

RefSeq mRNAs(3)
Models - Gene (30)
Models - mRNA (31)
mRNAs (6)
ESTs (39)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016778 NM_001016778.2 EF-hand calcium-binding domain-containing protein 1 1221 bp NP_001016778 X. tropicalis
XM_012964728 XM_012964728.2 EF-hand calcium-binding domain-containing protein 1 isoform X1 1091 bp XP_012820182 X. tropicalis
NM_001096226 NM_001096226.1 calaxin 855 bp NP_001089695 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g29044 X. laevis.S
NCBI 10.0 XBXT10g011825 X. tropicalis
ENSEMBL 10.0 efcab1 X. tropicalis
Xenbase 9.2 gene14756 X. laevis.S
JGI 9.1 Xelaev18033170m.g X. laevis.S
Xenbase 9.1 gene447 X. tropicalis
JGI 8.0 Xetrov14026732m.g X. tropicalis
JGI 7.2 Xelaev16037538m.g X. laevis.S
JGI 7.1 Xetro.F01225 X. tropicalis
JGI 6.0 XeXenL6RMv10021083m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000022013 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3200009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3200031 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_320000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3200010 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_320000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_320000032 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_320000033 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_320000011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3200032 X. tropicalis
JGI 4.1 e_gw1.320.31.1 X. tropicalis
JGI 4.1 e_gw1.320.37.1 X. tropicalis
JGI 4.1 e_gw1.320.63.1 X. tropicalis
JGI 4.1 gw1.320.31.1 X. tropicalis
JGI 4.1 gw1.320.37.1 X. tropicalis
JGI 4.1 gw1.320.63.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3200021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200063 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA54630 X. laevis.S
NCBI 10.0 mRNA058664 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117872 X. tropicalis
Xenbase 9.2 rna43018 X. laevis.S
Xenbase 9.1 rna1393 X. tropicalis
JGI 9.1 Xelaev18033170m X. laevis.S
JGI 8.0 Xetrov14026732m X. tropicalis
JGI 7.2 Xelaev16037538m X. laevis.S
JGI 7.1 Xetro.F01225.2 X. tropicalis
JGI 7.1 Xetro.F01225.1 X. tropicalis
JGI 6.0 XeXenL6RMv10021083m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_320000032 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_320000009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200031 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3200021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3200010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3200032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3200031 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3200009 X. tropicalis
JGI 4.1 e_gw1.320.63.1 X. tropicalis
JGI 4.1 e_gw1.320.37.1 X. tropicalis
JGI 4.1 e_gw1.320.31.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047645 X. tropicalis
JGI 4.1 gw1.320.37.1 X. tropicalis
JGI 4.1 gw1.320.63.1 X. tropicalis
JGI 4.1 gw1.320.31.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_320000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_320000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_320000033 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7548273 BC158143 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas107m05 CR855706 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001016778 X. tropicalis
XM_012964728 X. tropicalis
IMAGE:7390962 BC106351 X. laevis.S
NM_001096226 X. laevis.S

ESTs (39)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas033l12 AL648987 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107m05 AL965608 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu066h03 AL778447 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA027c06 CR413482 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA005n16 CR417623 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA072m01 CR433633 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA059n20 CR435690 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA069n21 CR437217 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA074j09 CR443049 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA033b07 BX716067 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA029c20 BX743937 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7629451 CX368664 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626109 CX379067 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs26F03 CN085993 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7647957 CX806582 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
CAAO9099 CX957178 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706445 CX958241 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:9009540 EL853676 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013028 EL859049 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7539809 CX460758 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562482 CX466818 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548273 CX490091 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7647957 CX806581 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas107m05 BX755370 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8884717 EL841033 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7562482 CX466817 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA033b07 BX716068 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7548273 CX490090 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO9099 CX957177 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA029c20 BX743938 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu066h03 BX687403 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas104g17 BX754215 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7629451 CX368663 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:9013028 EL859050 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7706445 CX958240 3' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs26F03 CN085992 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA059n20 CR435691 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:9009540 EL853677 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL022n13 BJ033788 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15