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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (260) Proteins (82) Interactants (14) Wiki
XB-GENEPAGE-5729482

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rapgef1 - All

Models - Gene (34)
Models - mRNA (53)
mRNAs (15)
ESTs (102)

Models - Gene (34)

Source Version Model Species
NCBI 10.0 XBXT10g010553 X. tropicalis
NCBI 10.1 XBXL10_1g37614 X. laevis.S
NCBI 10.1 XBXL10_1g34394 X. laevis.L
ENSEMBL 10.0 rapgef1 X. tropicalis
JGI 9.1 Xelaev18041615m.g X. laevis.S
JGI 9.1 Xelaev18038412m.g X. laevis.L
Xenbase 9.1 gene5023 X. tropicalis
Xenbase 9.2 gene5923 X. laevis.S
Xenbase 9.2 gene4109 X. laevis.L
ENSEMBL 9.1 rapgef1 X. tropicalis
JGI 8.0 Xetrov14032305m.g X. tropicalis
JGI 7.1 Xetro.H00133 X. tropicalis
JGI 7.2 Xelaev16074469m.g X. laevis.S
JGI 6.0 XeXenL6RMv10039715m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000001485 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_191000001 X. tropicalis
JGI 4.1 e_gw1.191.16.1 X. tropicalis
JGI 4.1 e_gw1.191.203.1 X. tropicalis
JGI 4.1 e_gw1.191.238.1 X. tropicalis
JGI 4.1 e_gw1.191.239.1 X. tropicalis
JGI 4.1 e_gw1.191.259.1 X. tropicalis
JGI 4.1 e_gw1.191.262.1 X. tropicalis
JGI 4.1 e_gw1.191.263.1 X. tropicalis
JGI 4.1 e_gw1.191.264.1 X. tropicalis
JGI 4.1 gw1.191.259.1 X. tropicalis
JGI 4.1 gw1.191.262.1 X. tropicalis
JGI 4.1 gw1.191.263.1 X. tropicalis
JGI 4.1 gw1.191.264.1 X. tropicalis
JGI 4.1 gw1.191.16.1 X. tropicalis
JGI 4.1 gw1.191.203.1 X. tropicalis
JGI 4.1 gw1.191.238.1 X. tropicalis
JGI 4.1 gw1.191.239.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000030 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_191000009 X. tropicalis

Models - mRNA (53)

Source Version Model Species
NCBI 10.0 mRNA052173 X. tropicalis
NCBI 10.1 XBmRNA64928 X. laevis.L
NCBI 10.1 XBmRNA71035 X. laevis.S
ENSEMBL 10.0 ENSXETT00000075804 X. tropicalis
ENSEMBL 10.0 ENSXETT00000003111 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079738 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084697 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071676 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060529 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062416 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080710 X. tropicalis
JGI 9.1 Xelaev18038412m X. laevis.L
JGI 9.1 Xelaev18041615m X. laevis.S
Xenbase 9.1 rna16368 X. tropicalis
Xenbase 9.2 rna11971 X. laevis.L
Xenbase 9.2 rna17343 X. laevis.S
ENSEMBL 9.1 ENSXETT00000084697 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071676 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080710 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079738 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075804 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092026 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086481 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060529 X. tropicalis
ENSEMBL 9.1 ENSXETT00000003111 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062416 X. tropicalis
JGI 8.0 Xetrov14032305m X. tropicalis
JGI 7.1 Xetro.H00133.2 X. tropicalis
JGI 7.1 Xetro.H00133.3 X. tropicalis
JGI 7.1 Xetro.H00133.1 X. tropicalis
JGI 7.1 Xetro.H00133.4 X. tropicalis
JGI 7.2 Xelaev16074469m X. laevis.S
JGI 6.0 XeXenL6RMv10039715m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_191000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003111 X. tropicalis
JGI 4.1 e_gw1.191.16.1 X. tropicalis
JGI 4.1 e_gw1.191.203.1 X. tropicalis
JGI 4.1 e_gw1.191.238.1 X. tropicalis
JGI 4.1 e_gw1.191.239.1 X. tropicalis
JGI 4.1 e_gw1.191.259.1 X. tropicalis
JGI 4.1 e_gw1.191.262.1 X. tropicalis
JGI 4.1 e_gw1.191.263.1 X. tropicalis
JGI 4.1 e_gw1.191.264.1 X. tropicalis
JGI 4.1 gw1.191.259.1 X. tropicalis
JGI 4.1 gw1.191.262.1 X. tropicalis
JGI 4.1 gw1.191.263.1 X. tropicalis
JGI 4.1 gw1.191.264.1 X. tropicalis
JGI 4.1 gw1.191.16.1 X. tropicalis
JGI 4.1 gw1.191.203.1 X. tropicalis
JGI 4.1 gw1.191.238.1 X. tropicalis
JGI 4.1 gw1.191.239.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000030 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_191000009 X. tropicalis

mRNAs (15)

Clone Accession Species Library Anatomy Stage
NM_001045665 X. tropicalis
TEgg095d21 CR942489 X. tropicalis
IMAGE:7684625 BC166138 X. tropicalis
XM_012968553 X. tropicalis
XM_012968552 X. tropicalis
XM_012968551 X. tropicalis
XM_031890514 X. tropicalis
IMAGE:5512106 BC073324 X. laevis.S
NM_001092303 X. laevis.S
XM_041572438 X. laevis.L
XM_041572437 X. laevis.L
XM_041572436 X. laevis.L
XM_041572435 X. laevis.L
XM_041572434 X. laevis.L
XM_041572433 X. laevis.L

ESTs (102)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9010459 EL854596 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8932579 EL668145 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8868553 EL708039 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8956401 EL656557 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8957816 EL652563 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8933999 EL634989 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st111n21 DC194861 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st109n21 DC194358 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7786400 CX328202 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630213 CX369821 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623310 CX372604 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594314 CX331584 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596572 CX337261 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN11427 CX927265 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11268 CX926971 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7851934 DT392015 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7717387 CX978474 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7694261 CX921910 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692678 CX919405 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7656330 CX827323 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654480 CX823919 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653709 CX822110 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7647607 CX805789 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA041k17 CR583761 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017f06 CR568526 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA050j22 CR423318 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas123p08 AL972041 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas133f09 AL963578 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas038c22 AL651629 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu124c08 AL799854 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu112m14 AL788233 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas078i20 AL774471 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas072e07 AL773964 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu046k06 AL658999 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030h13 AL656377 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu032m05 AL655791 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6982783 CF226562 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:9010459 EL854597 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8932579 EL668144 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8868553 EL708038 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8933999 EL634988 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
rst109n21 DC163713 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAN11427 CX927264 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11268 CX926970 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7851934 DT392014 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7786400 DR904439 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623310 DR899232 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7717387 CX978473 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7694261 CX921909 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692678 CX919404 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7654480 CX823918 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653709 CX822109 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7647607 CX805788 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7630213 CX369820 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594314 CX331583 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA041k17 CR583762 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017f06 CR568527 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA050j22 CR423319 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas123p08 BX760201 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas094i18 BX752315 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu112m14 BX700416 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124c08 BX697275 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl319p18 DC128976 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl252l16 DC109582 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl293n01 DC121361 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk107i10ex DC038036 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk72k22ex DC058595 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk147j12ex DC050964 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk146j18ex DC050641 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8542148 EB475588 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8321848 DY551278 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8318387 DY549074 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7979075 DR728597 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7981273 DR720463 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL508d15ex BP703388 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL155o07 BJ096995 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL074f13 BJ061885 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL026h19 BJ034140 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL038j09 BJ039810 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5156573 CA793214 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6631226 BU906257 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5542454 BQ737484 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3744754 BF426479 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
PBX0107F07 AW641551 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
za36c11 AW158186 5' X. laevis.S Xenopus EST library brain NF stage 45 to NF stage 66
rxl308h05 DC090600 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl293n01 DC086563 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl252l16 DC074977 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl319p18 DC093238 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk72k22ex DC025174 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk107i10ex DC005113 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk147j12ex DC017632 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk146j18ex DC017314 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk148j12ex DC017940 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8542148 EC275666 3' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:7981273 DR720373 3' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL508d15ex BP736298 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL155o07 BJ099990 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL074f13 BJ080054 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25