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Summary Expression Phenotypes Gene Literature (2) GO Terms (0) Nucleotides (118) Proteins (47) Interactants (308) Wiki
XB-GENEPAGE-5730807

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for tcaf1 - All

Models - Gene (25)
Models - mRNA (34)
mRNAs (8)
ESTs (28)

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g011298 X. tropicalis
NCBI 10.1 XBXL10_1g12942 X. laevis.L
ENSEMBL 10.0 tcaf1 X. tropicalis
Xenbase 9.1 gene4591 X. tropicalis
Xenbase 9.2 gene1692 X. laevis.L
ENSEMBL 9.1 tcaf1 X. tropicalis
JGI 7.1 Xetro.G00995 X. tropicalis
JGI 7.2 Xelaev16007143m.g X. laevis.L
JGI 6.0 XeXenL6RMv10033415m.g X. laevis.L
JGI 6.0 XeXenL6RMv10040668m.g X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_103000013 X. tropicalis
JGI 4.1 e_gw1.103.144.1 X. tropicalis
JGI 4.1 e_gw1.103.198.1 X. tropicalis
JGI 4.1 e_gw1.103.288.1 X. tropicalis
JGI 4.1 gw1.103.144.1 X. tropicalis
JGI 4.1 gw1.103.198.1 X. tropicalis
JGI 4.1 gw1.103.288.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1030063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030142 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030196 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030285 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030096 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1030031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000097 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000031 X. tropicalis

Models - mRNA (34)

Source Version Model Species
NCBI 10.0 mRNA056075 X. tropicalis
NCBI 10.1 XBmRNA24510 X. laevis.L
ENSEMBL 10.0 ENSXETT00000071077 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066463 X. tropicalis
ENSEMBL 10.0 ENSXETT00000113691 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092128 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060935 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062854 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063796 X. tropicalis
Xenbase 9.1 rna14951 X. tropicalis
Xenbase 9.2 rna4931 X. laevis.L
ENSEMBL 9.1 ENSXETT00000071077 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066463 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092128 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063796 X. tropicalis
JGI 7.1 Xetro.G00995.1 X. tropicalis
JGI 7.2 Xelaev16007143m X. laevis.L
JGI 6.0 XeXenL6RMv10033415m X. laevis.L
JGI 6.0 XeXenL6RMv10040668m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_103000013 X. tropicalis
JGI 4.1 e_gw1.103.144.1 X. tropicalis
JGI 4.1 e_gw1.103.198.1 X. tropicalis
JGI 4.1 e_gw1.103.288.1 X. tropicalis
JGI 4.1 gw1.103.144.1 X. tropicalis
JGI 4.1 gw1.103.198.1 X. tropicalis
JGI 4.1 gw1.103.288.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1030063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030142 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030196 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030285 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030096 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1030031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000097 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000031 X. tropicalis

mRNAs (8)

Clone Accession Species Library Anatomy Stage
TGas053p21 CR942571 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7578208 BC159086 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_002934560 X. tropicalis
XM_004915986 X. tropicalis
XM_031899109 X. tropicalis
XM_031899108 X. tropicalis
IMAGE:5516361 BC084073 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001094696 X. laevis.L

ESTs (28)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7578208 CX416591 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538875 CX450935 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567137 CX507428 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA071n22 CR426890 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas072o19 AL775501 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas017e10 AL629366 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas005o01 AL595348 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas005g08 AL594236 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas053p21 AL676233 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G4g10 AL643870 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7567137 CX507427 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538875 CX450934 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578208 CX416590 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA071n22 CR426891 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas053p21 BX746604 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xlk128f13ex DC044711 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL072b06 BJ061133 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086i09 BJ066556 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL005n02 BJ031013 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5516361 CF286303 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3517076 BG347924 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3399998 BG162078 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
PBX0054B06 AW637083 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl315o03 DC092633 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk128f13ex DC011561 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL052m04 BJ086334 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL100o21 BJ084913 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086b11 BJ083744 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25