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Summary Expression Phenotypes Gene Literature (22) GO Terms (71) Nucleotides (224) Proteins (55) Interactants (359) Wiki
XB-GENEPAGE-5759105

Show:     All X. tropicalis X. laevis

Nucleotide sequences for vcl - All

RefSeq mRNAs(7)
Models - Gene (27)
Models - mRNA (35)
mRNAs (9)
ESTs (97)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001097253 NM_001097253.1 vinculin 4948 bp NP_001090722 X. tropicalis
XM_031904675 XM_031904675.1 XP_031760535.1 vinculin isoform X1 6828 bp XP_031760535 X. tropicalis
XM_031904676 XM_031904676.1 XP_031760536.1 vinculin isoform X1 6378 bp XP_031760536 X. tropicalis
XM_031904677 XM_031904677.1 XP_031760537.1 vinculin isoform X2 6374 bp XP_031760537 X. tropicalis
XM_031904678 XM_031904678.1 XP_031760538.1 vinculin isoform X3 6591 bp XP_031760538 X. tropicalis
XM_018239443 XM_018239443.2 vinculin isoform X2 6193 bp XP_018094932 X. laevis.S
XM_018239445 XM_018239445.2 vinculin isoform X1 6432 bp XP_018094934 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g33017 X. laevis.S
NCBI 10.0 XBXT10g018074 X. tropicalis
ENSEMBL 10.0 vcl X. tropicalis
Xenbase 9.2 gene36008 X. laevis.S
JGI 9.1 Xelaev18000573m.g X. laevis.S
Xenbase 9.1 gene27779 X. tropicalis
ENSEMBL 9.1 vcl X. tropicalis
JGI 8.0 Xetrov14029530m.g X. tropicalis
JGI 7.2 Xelaev16011961m.g X. laevis.S
JGI 7.1 Xetro.D00244 X. tropicalis
JGI 6.0 XeXenL6RMv10027302m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000007084 X. tropicalis
JGI 4.1 gw1.714.5.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_714000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_714000002 X. tropicalis
JGI 4.1 gw1.714.8.1 X. tropicalis
JGI 4.1 e_gw1.714.28.1 X. tropicalis
JGI 4.1 e_gw1.714.34.1 X. tropicalis
JGI 4.1 e_gw1.714.5.1 X. tropicalis
JGI 4.1 e_gw1.714.6.1 X. tropicalis
JGI 4.1 e_gw1.714.7.1 X. tropicalis
JGI 4.1 e_gw1.714.8.1 X. tropicalis
JGI 4.1 gw1.714.28.1 X. tropicalis
JGI 4.1 gw1.714.34.1 X. tropicalis
JGI 4.1 gw1.714.6.1 X. tropicalis
JGI 4.1 gw1.714.7.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_714000003 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA62338 X. laevis.S
ENSEMBL 10.0 ENSXETT00000061084 X. tropicalis
ENSEMBL 10.0 ENSXETT00000015422 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124044 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088450 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073720 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121648 X. tropicalis
NCBI 10.0 mRNA089246 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074118 X. tropicalis
Xenbase 9.2 rna76169 X. laevis.S
ENSEMBL 9.1 ENSXETT00000015422 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061084 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088450 X. tropicalis
Xenbase 9.1 rna54001 X. tropicalis
JGI 9.1 Xelaev18000573m X. laevis.S
JGI 8.0 Xetrov14029530m X. tropicalis
JGI 7.2 Xelaev16011961m X. laevis.S
JGI 7.1 Xetro.D00244.1 X. tropicalis
JGI 6.0 XeXenL6RMv10027302m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_714000001 X. tropicalis
JGI 4.1 e_gw1.714.34.1 X. tropicalis
JGI 4.1 e_gw1.714.5.1 X. tropicalis
JGI 4.1 e_gw1.714.6.1 X. tropicalis
JGI 4.1 e_gw1.714.7.1 X. tropicalis
JGI 4.1 e_gw1.714.8.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015422 X. tropicalis
JGI 4.1 e_gw1.714.28.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_714000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_714000003 X. tropicalis
JGI 4.1 gw1.714.28.1 X. tropicalis
JGI 4.1 gw1.714.34.1 X. tropicalis
JGI 4.1 gw1.714.5.1 X. tropicalis
JGI 4.1 gw1.714.6.1 X. tropicalis
JGI 4.1 gw1.714.7.1 X. tropicalis
JGI 4.1 gw1.714.8.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:7683639 BC127288 X. tropicalis
NM_001097253 X. tropicalis
XM_031904675 X. tropicalis
XM_031904676 X. tropicalis
XM_031904677 X. tropicalis
XM_031904678 X. tropicalis
XM_018239443 X. laevis.S
XM_018239445 X. laevis.S
Z19541 X. laevis.S

ESTs (97)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7657158 CX828834 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8865138 EL702866 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8869420 EL710219 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st70c10 DC183972 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st71c10 DC184213 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7091225 CK653912 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas016b02 AL632043 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas039l03 AL653862 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas063m15 AL675112 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064m15 AL675199 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas062m04 AL683338 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111c10 AL959854 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132i12 AL969232 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120c23 AL970781 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7579391 CX418129 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530616 CX420080 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527925 CX424593 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533470 CX427162 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541901 CX448371 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539053 CX451509 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569908 CX454177 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568918 CX457685 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561471 CX464472 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521913 CX470489 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565192 CX481883 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552411 CX494937 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557878 CX496917 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555576 CX503054 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557280 CX505839 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551294 CX510849 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu074e09 AL779572 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102a05 AL805272 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA066n10 CR429497 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA039k15 CR580549 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7791264 CX325038 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626915 CX380699 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7690726 CX915961 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692811 CX918985 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692639 CX919128 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696125 CX925435 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696268 CX925785 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7737714 DN025718 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8920447 EL834549 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7552411 CX494936 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas064m15 BX748565 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120c23 BX753044 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132i12 BX761235 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7626915 CX380698 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7530616 CX420079 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577568 CX423610 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7791264 DR906199 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7533470 CX427161 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7657158 CX828833 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7541901 CX448370 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8865138 EL702865 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7539053 CX451508 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7690726 CX915960 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7569908 CX454176 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568918 CX457684 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7692811 CX918984 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7521913 CX470488 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7692639 CX919127 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7565192 CX481882 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7696125 CX925434 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7555576 CX503053 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7696268 CX925784 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7557280 CX505838 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551294 CX510848 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7737714 DN025717 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8869420 EL710218 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst70c10 DC153787 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu074e09 BX688143 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu102a05 BX694518 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7091225 CN316766 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8920447 EL834550 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTbA066n10 CR429498 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas062m04 BX748250 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xlk143i23ex DC049654 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5542666 BQ735841 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5543369 BQ732522 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8539497 EB465474 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:4683868 BQ736328 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4682486 BQ733274 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL107f05 BJ068645 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071f10 BJ074755 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086d07 BJ066463 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL094p17 BJ071625 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk140n14ex DC048771 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL086d07 BJ083782 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108a01 BJ089763 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl266m20 DC078941 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk140n14ex DC015502 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk143i23ex DC016361 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL107f05 BJ090259 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL094p17 BJ091378 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071f10 BJ081343 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL052h22 BJ086252 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25