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Summary Expression Phenotypes Gene Literature (7) GO Terms (29) Nucleotides (74) Proteins (46) Interactants (300) Wiki
XB-GENEPAGE-5822251

Show:     All X. tropicalis X. laevis

Nucleotide sequences for satb2 - All

RefSeq mRNAs(10)
Models - Gene (21)
Models - mRNA (25)
mRNAs (11)
ESTs (3)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
XM_002937713 XM_002937713.5 DNA-binding protein SATB2 isoform X2 5290 bp XP_002937759 X. tropicalis
XM_031893395 XM_031893395.1 XP_031749255.1 DNA-binding protein SATB2 isoform X1 5302 bp XP_031749255 X. tropicalis
XM_031893396 XM_031893396.1 XP_031749256.1 DNA-binding protein SATB2 isoform X1 4921 bp XP_031749256 X. tropicalis
XM_031893397 XM_031893397.1 XP_031749257.1 DNA-binding protein SATB2 isoform X3 5093 bp XP_031749257 X. tropicalis
NM_001280619 NM_001280619.1 SATB homeobox 2 S homeolog 2298 bp NP_001267548 X. laevis.S
XM_041576199 XM_041576199.1 XP_041432133.1 DNA-binding protein SATB2 isoform X1 3854 bp XP_041432133 X. laevis.L
XM_041576200 XM_041576200.1 XP_041432134.1 DNA-binding protein SATB2 isoform X1 2921 bp XP_041432134 X. laevis.L
XM_041576201 XM_041576201.1 XP_041432135.1 DNA-binding protein SATB2 isoform X1 2882 bp XP_041432135 X. laevis.L
XM_041576202 XM_041576202.1 XP_041432136.1 DNA-binding protein SATB2 isoform X2 3842 bp XP_041432136 X. laevis.L
XM_041576203 XM_041576203.1 XP_041432137.1 DNA-binding protein SATB2 isoform X3 3641 bp XP_041432137 X. laevis.L

Models - Gene (21)

Source Version Model Species
NCBI 10.1 XBXL10_1g43656 X. laevis.S
NCBI 10.1 XBXL10_1g40872 X. laevis.L
NCBI 10.0 XBXT10g007329 X. tropicalis
ENSEMBL 10.0 satb2 X. tropicalis
Xenbase 9.2 gene20470 X. laevis.L
Xenbase 9.2 gene2620 X. laevis.S
JGI 9.1 Xelaev18044921m.g X. laevis.L
JGI 9.1 Xelaev18047353m.g X. laevis.S
Xenbase 9.1 gene18465 X. tropicalis
ENSEMBL 9.1 mcm7 X. tropicalis
JGI 7.1 Xetro.I00488 X. tropicalis
JGI 6.0 XeXenL6RMv10008144m.g X. laevis.S
JGI 4.1 gw1.312.77.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_312000010 X. tropicalis
JGI 4.1 gw1.312.35.1 X. tropicalis
JGI 4.1 e_gw1.312.77.1 X. tropicalis
JGI 4.1 e_gw1.312.54.1 X. tropicalis
JGI 4.1 e_gw1.312.35.1 X. tropicalis
JGI 4.1 gw1.312.54.1 X. tropicalis
JGI 4.1 C_scaffold_312000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_312000035 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA82200 X. laevis.S
NCBI 10.1 XBmRNA77100 X. laevis.L
NCBI 10.0 mRNA036335 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101305 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093766 X. tropicalis
Xenbase 9.2 rna7613 X. laevis.S
Xenbase 9.2 rna59781 X. laevis.L
JGI 9.1 Xelaev18044921m X. laevis.L
JGI 9.1 Xelaev18047353m X. laevis.S
Xenbase 9.1 rna39201 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101305 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073214 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075669 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093766 X. tropicalis
JGI 7.1 Xetro.I00488.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008144m X. laevis.S
JGI 4.1 gw1.312.35.1 X. tropicalis
JGI 4.1 e_gw1.312.35.1 X. tropicalis
JGI 4.1 e_gw1.312.54.1 X. tropicalis
JGI 4.1 e_gw1.312.77.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_312000035 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_312000010 X. tropicalis
JGI 4.1 C_scaffold_312000006 X. tropicalis
JGI 4.1 gw1.312.54.1 X. tropicalis
JGI 4.1 gw1.312.77.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_002937713 X. tropicalis
XM_031893395 X. tropicalis
XM_031893396 X. tropicalis
XM_031893397 X. tropicalis
JN034040 X. laevis.S
NM_001280619 X. laevis.S
XM_041576199 X. laevis.L
XM_041576200 X. laevis.L
XM_041576201 X. laevis.L
XM_041576202 X. laevis.L
XM_041576203 X. laevis.L

ESTs (3)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7788156 CX333264 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7791527 DR906128 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7720194 CX983904 5' X. tropicalis NIH_XGC_tropInt1 intestine frog