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Summary Expression Phenotypes Gene Literature (0) GO Terms (15) Nucleotides (253) Proteins (74) Interactants (29) Wiki
XB-GENEPAGE-5825104

Show:     All X. tropicalis X. laevis

Nucleotide sequences for idh3b - All

RefSeq mRNAs(7)
Models - Gene (32)
Models - mRNA (49)
mRNAs (9)
ESTs (90)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001126521 NM_001126521.1 isocitrate dehydrogenase 1416 bp NP_001119993 X. tropicalis
XM_012954117 XM_012954117.3 isocitrate dehydrogenase 1803 bp XP_012809571 X. tropicalis
XM_012954119 XM_012954119.3 isocitrate dehydrogenase 1743 bp XP_012809573 X. tropicalis
XM_031894589 XM_031894589.1 XP_031750449.1 isocitrate dehydrogenase 1809 bp XP_031750449 X. tropicalis
XM_031894669 XM_031894669.1 XP_031750529.1 isocitrate dehydrogenase 1563 bp XP_031750529 X. tropicalis
NM_001091926 NM_001091926.1 isocitrate dehydrogenase (NAD(+)) 3 beta S homeolog 1414 bp NP_001085395 X. laevis.S
XM_018236655 XM_018236655.2 isocitrate dehydrogenase (NAD(+)) 3 beta S homeolog isoform X1 1751 bp XP_018092144 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g3513 X. laevis.S
NCBI 10.0 XBXT10g001486 X. tropicalis
ENSEMBL 10.0 idh3b X. tropicalis
Xenbase 9.2 gene40497 X. laevis.S
JGI 9.1 Xelaev18008676m.g X. laevis.S
Xenbase 9.1 gene22826 X. tropicalis
ENSEMBL 9.1 idh3b X. tropicalis
ENSEMBL 9.1 dusp9 X. tropicalis
JGI 7.1 Xetro.K01733 X. tropicalis
JGI 6.0 XeXenL6RMv10012400m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000014969 X. tropicalis
JGI 4.1 estExt_Genewise1.C_13570027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_13570032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_13570033 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1357000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_13570002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_13570003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_13570001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1357000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1357000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1357000001 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_13570001 X. tropicalis
JGI 4.1 gw1.1357.33.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_13570002 X. tropicalis
JGI 4.1 e_gw1.1357.27.1 X. tropicalis
JGI 4.1 e_gw1.1357.3.1 X. tropicalis
JGI 4.1 e_gw1.1357.32.1 X. tropicalis
JGI 4.1 e_gw1.1357.33.1 X. tropicalis
JGI 4.1 gw1.1357.27.1 X. tropicalis
JGI 4.1 gw1.1357.3.1 X. tropicalis
JGI 4.1 gw1.1357.32.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_13570003 X. tropicalis

mRNAs based on gene models(49)

Source Version Model Species
NCBI 10.1 XBmRNA6446 X. laevis.S
ENSEMBL 10.0 ENSXETT00000075101 X. tropicalis
ENSEMBL 10.0 ENSXETT00000032718 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079808 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101278 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064914 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068644 X. tropicalis
NCBI 10.0 mRNA007485 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102039 X. tropicalis
Xenbase 9.2 rna82518 X. laevis.S
ENSEMBL 9.1 ENSXETT00000102039 X. tropicalis
Xenbase 9.1 rna46043 X. tropicalis
JGI 9.1 Xelaev18008676m X. laevis.S
ENSEMBL 9.1 ENSXETT00000016768 X. tropicalis
ENSEMBL 9.1 ENSXETT00000032718 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064914 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068644 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075101 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079808 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101278 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101412 X. tropicalis
JGI 7.1 Xetro.K01733.4 X. tropicalis
JGI 7.1 Xetro.K01733.3 X. tropicalis
JGI 7.1 Xetro.K01733.2 X. tropicalis
JGI 7.1 Xetro.K01733.1 X. tropicalis
JGI 7.1 Xetro.K01733.5 X. tropicalis
JGI 6.0 XeXenL6RMv10012400m X. laevis.S
JGI 4.1 estExt_Genewise1.C_13570027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_13570032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_13570033 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1357000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1357000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1357000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1357000001 X. tropicalis
JGI 4.1 gw1.1357.27.1 X. tropicalis
JGI 4.1 gw1.1357.3.1 X. tropicalis
JGI 4.1 gw1.1357.32.1 X. tropicalis
JGI 4.1 gw1.1357.33.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_13570003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_13570002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_13570001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_13570003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_13570002 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_13570001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000032718 X. tropicalis
JGI 4.1 e_gw1.1357.33.1 X. tropicalis
JGI 4.1 e_gw1.1357.32.1 X. tropicalis
JGI 4.1 e_gw1.1357.3.1 X. tropicalis
JGI 4.1 e_gw1.1357.27.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:7698518 BC158254 X. tropicalis NIH_XGC_tropTe5 testis frog
NM_001126521 X. tropicalis
XM_012954117 X. tropicalis
XM_012954119 X. tropicalis
XM_031894589 X. tropicalis
XM_031894669 X. tropicalis
IMAGE:4408522 BC072104 X. laevis.S
NM_001091926 X. laevis.S
XM_018236655 X. laevis.S

ESTs (90)

Clone Accession 5'/3' Species Library Anatomy Stage
st86e23 DC188032 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7666389 CX852116 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666262 CX852220 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8964819 EL655287 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7666675 CX852765 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7668891 CX874712 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7540931 CX462511 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7670889 CX878267 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8966312 EL658588 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7670795 CX878279 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7521811 CX470448 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7671805 CX879646 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7557537 CX505952 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7672575 CX881020 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7551372 CX511060 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7673817 CX883640 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7674676 CX885278 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8885166 EL841727 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TNeu099o03 AL790256 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9013821 EL859775 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9008424 EL837685 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915086 EL827885 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8926476 EL673237 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8932631 EL668176 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:9010490 EL855080 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7622915 CX371682 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8888072 EL846258 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7583933 CX414443 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8940471 EL644866 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8948484 EG651684 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7852618 DT392812 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7851265 DT390282 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7708178 CX961470 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698518 CX930736 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs05D05 CN074684 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8964130 EL653073 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
xtbs20L24 CN082324 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8903658 EL794665 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
st10h24 DC165743 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st32k13 DC172696 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7664038 CX848429 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
st61a18 DC181665 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7664213 CX848659 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8885166 EL841728 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7540931 CX462510 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521811 CX470447 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu099o03 BX696907 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7622915 CX371681 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7583933 CX414442 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs20L24 CN082323 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8903658 EL794666 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7664038 CX848428 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7664213 CX848658 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666389 CX852115 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666675 CX852764 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670889 CX878266 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670795 CX878278 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7671805 CX879645 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7672575 CX881019 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7673817 CX883639 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7698518 CX930735 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7851265 DT390281 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7852618 DT392811 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8940471 EL644865 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8932631 EL668175 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8926476 EL673236 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8915086 EL827886 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9010490 EL855081 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013821 EL859776 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL062g03 BJ059365 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108f02 BJ072912 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8641212 EB730392 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:8531155 EB481367 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:3473064 BI444526 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:8543789 EB480093 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8543189 EB475599 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8527386 EB463936 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8533083 EB472082 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL109f02 BJ073231 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4970064 CF290073 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998H028640 BX850675 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:8318417 DY565533 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8644704 EB732964 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
IMAGE:4970064 CF290074 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8543189 EC277616 3' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL109f02 BJ090568 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8641212 EB728561 3' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
XL062g03 BJ077872 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3549745 BG555270 3' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL108f02 BJ089857 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25