Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (8) GO Terms (45) Nucleotides (241) Proteins (55) Interactants (360) Wiki
XB-GENEPAGE-5841193

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ncbp1 - All

RefSeq mRNAs(4)
Models - Gene (35)
Models - mRNA (39)
mRNAs (9)
ESTs (104)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001006787 NM_001006787.1 nuclear cap-binding protein subunit 1 3038 bp NP_001006788 X. tropicalis
NM_001092041 NM_001092041.1 nuclear cap-binding protein subunit 1-A 3015 bp NP_001085510 X. laevis.L
NM_001092003 NM_001092003.1 nuclear cap-binding protein subunit 1-B 3056 bp NP_001085472 X. laevis.S
XM_041575208 XM_041575208.1 XP_041431142.1 nuclear cap-binding protein subunit 1-B isoform X1 3131 bp XP_041431142 X. laevis.S

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g4567 X. laevis.S
NCBI 10.1 XBXL10_1g1778 X. laevis.L
NCBI 10.0 XBXT10g018002 X. tropicalis
ENSEMBL 10.0 ncbp1 X. tropicalis
Xenbase 9.2 gene9675 X. laevis.L
Xenbase 9.2 gene1226 X. laevis.S
JGI 9.1 Xelaev18006494m.g X. laevis.L
JGI 9.1 Xelaev18009967m.g X. laevis.S
Xenbase 9.1 gene3804 X. tropicalis
ENSEMBL 9.1 ncbp1 X. tropicalis
JGI 7.2 Xelaev16055976m.g X. laevis.L
JGI 7.2 Xelaev16078439m.g X. laevis.S
JGI 7.1 Xetro.A01993 X. tropicalis
JGI 6.0 XeXenL6RMv10011886m.g X. laevis.L
JGI 6.0 XeXenL6RMv10053101m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000010179 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_229000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_229000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_229000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_229000004 X. tropicalis
JGI 4.1 e_gw1.229.64.1 X. tropicalis
JGI 4.1 e_gw1.229.65.1 X. tropicalis
JGI 4.1 e_gw1.229.66.1 X. tropicalis
JGI 4.1 gw1.229.64.1 X. tropicalis
JGI 4.1 gw1.229.65.1 X. tropicalis
JGI 4.1 gw1.229.66.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2290006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2290064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2290065 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2290004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2290014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2290015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2290005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_229000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2290066 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.1 XBmRNA3154 X. laevis.L
NCBI 10.1 XBmRNA8471 X. laevis.S
NCBI 10.0 mRNA088891 X. tropicalis
ENSEMBL 10.0 ENSXETT00000022452 X. tropicalis
Xenbase 9.2 rna3567 X. laevis.S
Xenbase 9.2 rna28152 X. laevis.L
Xenbase 9.1 rna12421 X. tropicalis
JGI 9.1 Xelaev18009967m X. laevis.S
JGI 9.1 Xelaev18006494m X. laevis.L
ENSEMBL 9.1 ENSXETT00000060868 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022452 X. tropicalis
JGI 7.2 Xelaev16055976m X. laevis.L
JGI 7.2 Xelaev16078439m X. laevis.S
JGI 7.1 Xetro.A01993.4 X. tropicalis
JGI 7.1 Xetro.A01993.2 X. tropicalis
JGI 7.1 Xetro.A01993.1 X. tropicalis
JGI 7.1 Xetro.A01993.3 X. tropicalis
JGI 6.0 XeXenL6RMv10053101m X. laevis.S
JGI 6.0 XeXenL6RMv10011886m X. laevis.L
JGI 4.1 estExt_FilteredModels1.C_2290006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2290005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2290015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2290014 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2290004 X. tropicalis
JGI 4.1 e_gw1.229.66.1 X. tropicalis
JGI 4.1 e_gw1.229.65.1 X. tropicalis
JGI 4.1 e_gw1.229.64.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022452 X. tropicalis
JGI 4.1 gw1.229.66.1 X. tropicalis
JGI 4.1 gw1.229.65.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_229000002 X. tropicalis
JGI 4.1 gw1.229.64.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_229000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_229000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_229000014 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_229000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2290066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2290065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2290064 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:6995369 BC075600 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas055a14 CR855671 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001006787 X. tropicalis
IMAGE:5073388 BC072867 X. laevis.L
NM_001092041 X. laevis.L
IMAGE:4970320 BC072815 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001092003 X. laevis.S
XM_041575208 X. laevis.S
XR_005963911 X. laevis.S

ESTs (104)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TGas108o01 AL962681 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st58j09 DC181068 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st59j09 DC181311 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st81g17 DC186854 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas011e13 AL629145 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040b18 AL651337 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas041o02 AL653506 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027h05 AL655448 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas063c13 AL675057 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064c13 AL675142 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055a14 AL678092 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065l06 AL682936 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas073o02 AL784064 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas125l12 AL956971 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087m16 AL960372 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas089o02 BX764003 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas089o03 BX764004 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7578300 CX416566 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579547 CX418218 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529274 CX426102 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529872 CX427070 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575908 CX431436 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525369 CX442634 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526303 CX443632 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526328 CX443921 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544097 CX459918 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540665 CX462023 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541086 CX462883 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521622 CX470137 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563951 CX474317 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564422 CX475243 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549626 CX484830 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548765 CX490841 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547229 CX500766 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu017o23 AL645104 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu028o07 AL646516 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108b06 AL790719 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6995369 CF239025 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTbA079b23 CR437403 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA022m08 CR439659 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7596491 CX336699 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs07D21 CN093028 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7799405 DN060488 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8889836 EL849323 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890580 EL850795 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst81g17 DC156763 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7799405 DN060487 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7579547 CX418217 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547229 CX500765 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540665 CX462022 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575908 CX431435 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA054k21 CR443704 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7564422 CX475242 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs07D21 CN093027 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7549626 CX484829 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7596491 DR891140 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas115p03 BX762326 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas125l12 BX759047 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu108p10 BX696444 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7548765 CX490840 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA079b23 CR437404 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
rst58j09 DC150804 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas064c13 BX745592 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055a14 BX745749 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065l06 BX746259 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087m16 BX751739 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xl321o23 DC129568 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl325o19 DC130820 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
3270 DN154798 5' X. laevis.L Xenopus laevis oocyte cDNA subtracted library oocyte unspecified stage
xl232k14 DC103472 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL092h05 BJ074203 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4680824 BI445663 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4202313 BG233551 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4970320 CF290232 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
3542 DN154810 5' X. laevis.L Xenopus laevis oocyte cDNA subtracted library oocyte unspecified stage
PBX0005G03 AW633269 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0121E08 AW642786 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6323810 CA972167 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3402330 BG037746 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998I198303 BX851450 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5157085 CA793322 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl223n23 DC100780 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL172o04 BJ615630 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl225m10 DC101366 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl226h11 DC101590 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl249p02 DC108722 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl252f14 DC109462 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl295c19 DC121717 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl299l03 DC122939 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl320o23 DC129275 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk128p19ex DC044921 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk147b14ex DC050801 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk101f14ex DC036057 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
R177 DV034436 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
IMAGE:8822875 EG570476 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL020c02 BJ033223 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL042i15 BJ038125 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL020c02 BJ048521 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl325o19 DC094935 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15