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Summary Expression Gene Literature (11) Nucleotides (137) Proteins (28) Interactants (8) Wiki
XB-GENEPAGE-5853279

Nucleotide sequences for 42Sp50 - All

Models - Gene (21)
Models - mRNA (21)
Unigene Clusters (3)
Gurdon EST Clusters (2)
mRNAs (7)
ESTs (83)

Models - Gene (21)

Source Version Model Species
JGI 7.1 Xetro.F00103 tropicalis
ENSEMBL 4.1 ENSXETG00000017744 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_459000001 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_459000001 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4590001 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4590005 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4590004 tropicalis
JGI 4.1 estExt_Genewise1.C_4590082 tropicalis
JGI 4.1 estExt_Genewise1.C_4590081 tropicalis
JGI 4.1 estExt_Genewise1.C_4590017 tropicalis
JGI 4.1 estExt_FilteredModels1.C_4590005 tropicalis
JGI 4.1 gw1.459.82.1 tropicalis
JGI 4.1 gw1.459.81.1 tropicalis
JGI 4.1 gw1.459.17.1 tropicalis
JGI 4.1 e_gw1.459.82.1 tropicalis
JGI 4.1 e_gw1.459.81.1 tropicalis
JGI 4.1 e_gw1.459.17.1 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4590001 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_459000001 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_459000005 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_459000004 tropicalis

Models - mRNA (21)

Source Version Model Species
JGI 7.1 Xetro.F00103.1 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_459000001 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4590001 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4590005 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4590004 tropicalis
JGI 4.1 estExt_Genewise1.C_4590082 tropicalis
JGI 4.1 estExt_Genewise1.C_4590081 tropicalis
JGI 4.1 estExt_Genewise1.C_4590017 tropicalis
JGI 4.1 estExt_FilteredModels1.C_4590005 tropicalis
JGI 4.1 gw1.459.82.1 tropicalis
JGI 4.1 gw1.459.81.1 tropicalis
JGI 4.1 gw1.459.17.1 tropicalis
JGI 4.1 e_gw1.459.82.1 tropicalis
JGI 4.1 e_gw1.459.81.1 tropicalis
JGI 4.1 e_gw1.459.17.1 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4590001 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_459000001 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_459000005 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_459000004 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_459000001 tropicalis
ENSEMBL 4.1 ENSXETT00000038508 tropicalis

Unigene Clusters (3)

ID Species
Str.7206 tropicalis
Str.77022 tropicalis
Xl.46752 laevis

Gurdon EST Clusters (2)

ID Species
1012071827 tropicalis
1012791235 laevis

mRNAs (7)

Clone Accession Species Library Anatomy Stage
NM_001011438 tropicalis
TEgg072m22 CR761209 tropicalis XGC-egg egg unfertilized egg
IMAGE:5383007 BC088488 tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
X142Sp50 X52975 laevis
Xl50 Z19545 laevis
IMAGE:6325023 BC133768 laevis Wellcome CRC pSK egg egg unfertilized egg
NM_001101761 laevis

ESTs (83)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8915680 EL828561 5' tropicalis NICHD_XGC_tropTe1 testis frog
CABI1296 DR877691 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
CABD5689 DN069999 5' tropicalis NIH_XGC_tropLun1 lung frog
CABD6597 DN071312 5' tropicalis NIH_XGC_tropLun1 lung frog
CABD5151 DN069022 5' tropicalis NIH_XGC_tropLun1 lung frog
IMAGE:7879843 DT441935 5' tropicalis NIH_XGC_tropSpl1 spleen frog
CAAO2559 CX932847 5' tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7866453 DT417248 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7864630 DT414774 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7862731 DT410836 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7860504 DT407361 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7858318 DT403166 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7855498 DT398445 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7827417 DN100354 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7758313 DR877069 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7757896 DR876479 5' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7831113 DR849307 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7828376 DR844520 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7828343 DR844273 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7824432 DN094821 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7823947 DN093689 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7823431 DN092329 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7822561 DN090829 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7821671 DN089536 5' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7806920 DN063066 5' tropicalis NIH_XGC_tropLun1 lung frog
IMAGE:7642119 CX796084 5' tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7519275 CX478483 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas128e05 AL965207 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas100g17 AL956131 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TEgg027a01 AL900413 5' tropicalis XGC-egg egg unfertilized egg
TEgg033i24 AL882317 5' tropicalis XGC-egg egg unfertilized egg
TEgg112j24 AL876516 5' tropicalis XGC-egg egg unfertilized egg
TEgg113m22 AL870450 5' tropicalis XGC-egg egg unfertilized egg
TEgg072m22 AL858089 5' tropicalis XGC-egg egg unfertilized egg
TGas042f01 AL653411 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021f09 AL632761 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu114d09 AL799765 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu111n04 AL793872 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5383007 BQ394683 5' tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:4465464 BI314608 5' tropicalis Wellcome CRC pCS107 tropicalis egg egg unfertilized egg
IMAGE:8915680 EL828562 3' tropicalis NICHD_XGC_tropTe1 testis frog
CABI1296 DR877690 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
CABD6597 DN071311 3' tropicalis NIH_XGC_tropLun1 lung frog
CABD5689 DN069998 3' tropicalis NIH_XGC_tropLun1 lung frog
IMAGE:7879843 DT441934 3' tropicalis NIH_XGC_tropSpl1 spleen frog
CAAO2559 CX932846 3' tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7866453 DT417247 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7864630 DT414773 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7862731 DT410835 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7860504 DT407360 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7858318 DT403165 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7855498 DT398444 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7823947 DN093688 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7827417 DN100353 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7758313 DR877068 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7757896 DR876478 3' tropicalis NIH_XGC_tropOvi1 oviduct frog
IMAGE:7831113 DR849306 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7828376 DR844519 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7828343 DR844272 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7823431 DN092328 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7822561 DN090828 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7821671 DN089535 3' tropicalis NIH_XGC_tropOva1 ovary frog
IMAGE:7642119 CX796083 3' tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7519275 CX478482 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TEgg027a01 BX781820 3' tropicalis XGC-egg egg unfertilized egg
TEgg072m22 BX780302 3' tropicalis XGC-egg egg unfertilized egg
TEgg033i24 BX770861 3' tropicalis XGC-egg egg unfertilized egg
TGas128e05 BX758567 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu111n04 BX695680 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu114d09 BX689859 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5383007 BQ394682 3' tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:4465464 BG886412 3' tropicalis Wellcome CRC pCS107 tropicalis egg egg unfertilized egg
IMAGE:4464603 BG514815 3' tropicalis Wellcome CRC pCS107 tropicalis egg egg unfertilized egg
XL220b09 BJ627985 5' laevis NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6325023 CA973013 5' laevis Wellcome CRC pSK egg egg unfertilized egg
BI940528 BI940528 5' laevis Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:4678821 BI675696 5' laevis Blackshear/Soares normalized Xenopus egg library egg unfertilized egg
BG409983 BG409983 5' laevis Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:3473790 BG162346 5' laevis Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
XENOPUS_SOURCE_ID:xlnga002a03 AW200208 5' laevis normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
XL220b09 BJ644265 3' laevis NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3473790 BG160796 3' laevis Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
BE026882 BE026882 3' laevis Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)

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