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Summary Expression Phenotypes Gene Literature (0) GO Terms (18) Nucleotides (179) Proteins (40) Interactants (27) Wiki
XB-GENEPAGE-5895777

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cdkal1 - All

RefSeq mRNAs(4)
Models - Gene (13)
Models - mRNA (27)
mRNAs (7)
ESTs (91)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_203863 NM_203863.1 threonylcarbamoyladenosine tRNA methylthiotransferase 2558 bp NP_989194 X. tropicalis
XM_012964437 XM_012964437.3 threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2 2613 bp XP_012819891 X. tropicalis
XM_012964438 XM_012964438.3 threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1 2628 bp XP_012819892 X. tropicalis
NM_001091487 NM_001091487.1 threonylcarbamoyladenosine tRNA methylthiotransferase 2639 bp NP_001084956 X. laevis.S

Models - Gene (13)

Source Version Model Species
NCBI 10.1 XBXL10_1g29374 X. laevis.S
NCBI 10.0 XBXT10g010368 X. tropicalis
ENSEMBL 10.0 cdkal1 X. tropicalis
Xenbase 9.2 gene5343 X. laevis.S
JGI 9.1 Xelaev18033499m.g X. laevis.S
Xenbase 9.1 gene21529 X. tropicalis
ENSEMBL 9.1 cdkal1 X. tropicalis
JGI 7.2 Xelaev16009874m.g X. laevis.S
JGI 7.1 Xetro.F00736 X. tropicalis
JGI 6.0 XeXenL6RMv10055346m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000022 X. tropicalis
JGI 4.1 e_gw1.596.19.1 X. tropicalis
JGI 4.1 gw1.596.19.1 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA55202 X. laevis.S
ENSEMBL 10.0 ENSXETT00000000030 X. tropicalis
NCBI 10.0 mRNA051289 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103905 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073211 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101804 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093864 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078895 X. tropicalis
Xenbase 9.2 rna15649 X. laevis.S
JGI 9.1 Xelaev18033499m X. laevis.S
ENSEMBL 9.1 ENSXETT00000078895 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093864 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095279 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096058 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073211 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101804 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068218 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103905 X. tropicalis
Xenbase 9.1 rna44038 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085964 X. tropicalis
ENSEMBL 9.1 ENSXETT00000000030 X. tropicalis
JGI 7.2 Xelaev16009874m X. laevis.S
JGI 7.1 Xetro.F00736.1 X. tropicalis
JGI 6.0 XeXenL6RMv10055346m X. laevis.S
JGI 4.1 gw1.596.19.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000000030 X. tropicalis
JGI 4.1 e_gw1.596.19.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:5308174 BC063205 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu091i12 CU075751 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_203863 X. tropicalis
XM_012964437 X. tropicalis
XM_012964438 X. tropicalis
IMAGE:3400926 BC070521 X. laevis.S NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
NM_001091487 X. laevis.S

ESTs (91)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:5307343 BQ388566 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas004k14 AL593991 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5307746 BQ389423 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas040m11 AL653795 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5308174 BQ389811 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988014 CF220669 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6987991 CF220688 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6987527 CF221094 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas075i03 AL776845 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7756446 DR873584 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7654550 CX824425 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas121c10 AL957343 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6993890 CF238186 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu091i12 AL781283 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084g14 AL804064 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7619326 CX346931 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7027753 CF781985 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA052n13 CR434480 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas112n22 AL962604 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA028d21 CR572476 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas112o12 AL965545 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr20A04 CN102765 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7585719 CX318292 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611600 CX403937 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7640285 CX386007 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs19D02 CN081598 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7577046 CX422978 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7608726 DR894805 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7570276 CX454746 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544807 CX486913 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs20A14 CN081898 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7851430 DT390793 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
XZT1190 CX360245 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7740264 DN030720 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7715558 CX975350 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7652636 CX820879 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9011079 EL855751 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TNeu091i12 BX695892 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XZT1190 CX360244 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7640285 CX386006 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611600 CX403936 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608726 CX409822 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619326 DR897959 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7756446 DR873583 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
xtbs19D02 CN081597 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs20A14 CN081897 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7652636 CX820878 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas121c10 BX759763 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas091i03 BX764345 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577046 CX422977 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570276 CX454745 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544807 DR889009 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9011079 EL855752 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7715558 CX975349 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:5307746 BQ389422 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308174 BQ389810 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7851430 DT390792 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7654550 CX824424 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTbA052n13 CR434481 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr20A04 CN102764 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
XL021e08 BJ035192 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
PBX0116E04 AW642247 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0124D01 AW643033 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3300381 BE026241 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6632191 BU907091 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6864373 CA987674 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL143p09 BJ093942 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL144p09 BJ094267 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL153k16 BJ096360 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL211c23 BJ625310 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL212a02 BJ625575 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL422d07ex BP676544 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439e05ex BP681944 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk148m04ex DC051340 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0052H09 AW636981 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL045p19 BJ038957 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8533365 EB475782 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:3400926 BG037489 5' X. laevis.S NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL053n08 BJ069587 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk148m04ex DC017992 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL439e05ex BP718318 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL422d07ex BP713812 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL211c23 BJ641764 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166c08 BJ630653 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164g08 BJ630186 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL144p09 BJ098200 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL053n08 BJ086686 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL143p09 BJ097959 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3300381 BE026960 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL045p19 BJ050884 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL021e08 BJ049825 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15