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Summary Expression Phenotypes Gene Literature (5) GO Terms (37) Nucleotides (191) Proteins (65) Interactants (423) Wiki
XB-GENEPAGE-5900837

Show:     All X. tropicalis X. laevis

Nucleotide sequences for kdm2a - All

RefSeq mRNAs(16)
Models - Gene (24)
Models - mRNA (38)
mRNAs (17)
ESTs (68)

RefSeq mRNAs (16)

Accession Version Protein Name Length Protein Species
NM_001011176 NM_001011176.1 lysine-specific demethylase 2A 4491 bp NP_001011176 X. tropicalis
XM_041571197 XP_041427131.1 lysine-specific demethylase 2A isoform X1 4457 bp XP_041427131 X. laevis.S
XM_041571198 XP_041427132.1 lysine-specific demethylase 2A isoform X2 4373 bp XP_041427132 X. laevis.S
XM_041571199 XP_041427133.1 lysine-specific demethylase 2A isoform X3 5140 bp XP_041427133 X. laevis.S
XM_041571200 XP_041427134.1 lysine-specific demethylase 2A isoform X4 4338 bp XP_041427134 X. laevis.S
XM_041571201 XP_041427135.1 lysine-specific demethylase 2A isoform X4 4432 bp XP_041427135 X. laevis.S
XM_041571202 XP_041427136.1 lysine-specific demethylase 2A isoform X4 4278 bp XP_041427136 X. laevis.S
XM_041571203 XP_041427137.1 lysine-specific demethylase 2A isoform X5 4394 bp XP_041427137 X. laevis.S
XM_041571204 XP_041427138.1 lysine-specific demethylase 2A isoform X5 4300 bp XP_041427138 X. laevis.S
XM_041571205 XP_041427139.1 lysine-specific demethylase 2A isoform X5 4174 bp XP_041427139 X. laevis.S
XM_041571206 XP_041427140.1 lysine-specific demethylase 2A isoform X6 4103 bp XP_041427140 X. laevis.S
XM_041571207 XP_041427141.1 lysine-specific demethylase 2A isoform X7 4013 bp XP_041427141 X. laevis.S
XM_041571208 XP_041427142.1 lysine-specific demethylase 2A isoform X8 5263 bp XP_041427142 X. laevis.S
XM_041571209 XP_041427143.1 lysine-specific demethylase 2A isoform X8 3659 bp XP_041427143 X. laevis.S
XM_018225580 XM_018225580.2 lysine-specific demethylase 2A isoform X1 4673 bp XP_018081069 X. laevis.L
XM_018225581 XM_018225581.2 lysine-specific demethylase 2A isoform X2 4578 bp XP_018081070 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g33053 X. laevis.S
NCBI 10.1 XBXL10_1g30841 X. laevis.L
NCBI 10.0 XBXT10g000067 X. tropicalis
ENSEMBL 10.0 kdm2a X. tropicalis
Xenbase 9.2 gene14143 X. laevis.L
Xenbase 9.2 gene46840 X. laevis.S
JGI 9.1 Xelaev18035111m.g X. laevis.L
JGI 9.1 Xelaev18037245m.g X. laevis.S
Xenbase 9.1 gene28172 X. tropicalis
ENSEMBL 9.1 kdm2a X. tropicalis
JGI 7.1 Xetro.K01000 X. tropicalis
JGI 6.0 XeXenL6RMv10010178m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000015793 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_800000007 X. tropicalis
JGI 4.1 e_gw1.800.3.1 X. tropicalis
JGI 4.1 e_gw1.800.41.1 X. tropicalis
JGI 4.1 gw1.800.3.1 X. tropicalis
JGI 4.1 gw1.800.38.1 X. tropicalis
JGI 4.1 gw1.800.41.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8000038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8000041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8000007 X. tropicalis
JGI 4.1 e_gw1.800.38.1 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA58218 X. laevis.L
NCBI 10.1 XBmRNA62390 X. laevis.S
ENSEMBL 10.0 ENSXETT00000089661 X. tropicalis
NCBI 10.0 mRNA000443 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096487 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097316 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097384 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067542 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070583 X. tropicalis
Xenbase 9.2 rna41196 X. laevis.L
Xenbase 9.2 rna91774 X. laevis.S
JGI 9.1 Xelaev18035111m X. laevis.L
ENSEMBL 9.1 ENSXETT00000089661 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067542 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096487 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084252 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097316 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097384 X. tropicalis
ENSEMBL 9.1 ENSXETT00000034422 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081287 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070583 X. tropicalis
Xenbase 9.1 rna54623 X. tropicalis
JGI 9.1 Xelaev18037245m X. laevis.S
JGI 7.1 Xetro.K01000.1 X. tropicalis
JGI 7.1 Xetro.K01000.2 X. tropicalis
JGI 6.0 XeXenL6RMv10010178m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_8000007 X. tropicalis
JGI 4.1 e_gw1.800.38.1 X. tropicalis
JGI 4.1 e_gw1.800.41.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034422 X. tropicalis
JGI 4.1 e_gw1.800.3.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8000038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_800000007 X. tropicalis
JGI 4.1 gw1.800.3.1 X. tropicalis
JGI 4.1 gw1.800.38.1 X. tropicalis
JGI 4.1 gw1.800.41.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
IMAGE:6980178 BC086264 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
NM_001011176 X. tropicalis
XM_041571197 X. laevis.S
XM_041571198 X. laevis.S
XM_041571199 X. laevis.S
XM_041571200 X. laevis.S
XM_041571201 X. laevis.S
XM_041571202 X. laevis.S
XM_041571203 X. laevis.S
XM_041571204 X. laevis.S
XM_041571205 X. laevis.S
XM_041571206 X. laevis.S
XM_041571207 X. laevis.S
XM_041571208 X. laevis.S
XM_041571209 X. laevis.S
XM_018225580 X. laevis.L
XM_018225581 X. laevis.L

ESTs (68)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu021f21 AL636214 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu054b08 AL678939 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu072o07 AL785473 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137i15 AL788046 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8928016 EL675995 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8948985 EG655906 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7744223 DN037325 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7706689 CX958282 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7694953 CX923488 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:9011119 EL855703 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7534760 CX429729 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr09B19 CN118977 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7538028 CX447434 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7688903 CX912062 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688753 CX912011 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7661481 CX843086 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646081 CX803122 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7596429 CX336624 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA056i04 BX730955 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA049d15 BX730614 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA023o10 BX715109 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA069l04 CR439830 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6980178 CF149668 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu114a19 AL797005 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr09B19 CN118976 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
rst94e04 DC159913 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7534760 CX429728 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538028 CX447433 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu054b08 BX685069 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu114a19 BX689841 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA069l04 CR439831 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA023o10 BX715110 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA056i04 BX730956 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7596429 DR891117 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7646081 CX803121 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7661481 CX843085 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7688753 CX912010 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688903 CX912061 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694953 CX923487 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7706689 CX958281 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7744223 DN037324 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8928016 EL675994 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:9011119 EL855704 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7299521 CO388033 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL182l08 BJ617878 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl277m20 DC116922 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL102o22 BJ067821 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7982729 DR720257 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL461l03ex BP690494 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL185f19 BJ618511 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL453e11ex BP687117 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl323j20 DC130095 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl310e05 DC126110 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL183l08 BJ618133 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl292p05 DC121127 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl236c21 DC104528 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL060b14 BJ058665 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089c11 BJ067075 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk72f02ex DC058471 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL143n11 BJ097925 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182l08 BJ634408 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL089c11 BJ084418 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl310e05 DC091079 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL060b14 BJ077173 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL185f19 BJ635079 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk72f02ex DC025052 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL461l03ex BP725076 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL183l08 BJ634662 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5