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Summary Expression Phenotypes Gene Literature (21) GO Terms (24) Nucleotides (115) Proteins (43) Interactants (165) Wiki
XB-GENEPAGE-5902268

Show:     All X. tropicalis X. laevis

Nucleotide sequences for efnb3 - All

RefSeq mRNAs(7)
Models - Gene (21)
Models - mRNA (22)
mRNAs (9)
ESTs (45)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001113010 NM_001113010.1 ephrin-B3 precursor 3011 bp NP_001106481 X. tropicalis
NM_001085842 NM_001085842.1 ephrin-B3 L homeolog precursor 1145 bp NP_001079311 X. laevis.L
XM_018250606 XM_018250606.2 ephrin-B3 L homeolog isoform X1 5943 bp XP_018106095 X. laevis.L
XM_018250607 XM_018250607.2 ephrin-B3 L homeolog isoform X2 5850 bp XP_018106096 X. laevis.L
XM_018250608 XM_018250608.2 ephrin-B3 L homeolog isoform X3 5851 bp XP_018106097 X. laevis.L
XM_018239717 XM_018239717.2 ephrin-B3 isoform X1 5274 bp XP_018095206 X. laevis.S
XM_018239718 XM_018239718.2 ephrin-B3 isoform X2 5273 bp XP_018095207 X. laevis.S

Models - Gene (21)

Source Version Model Species
NCBI 10.1 XBXL10_1g17454 X. laevis.S
NCBI 10.1 XBXL10_1g14642 X. laevis.L
NCBI 10.0 XBXT10g015015 X. tropicalis
ENSEMBL 10.0 efnb3 X. tropicalis
Xenbase 9.2 gene18941 X. laevis.L
JGI 9.1 Xelaev18019327m.g X. laevis.L
JGI 9.1 Xelaev18000922m.g X. laevis.S
Xenbase 9.1 gene30986 X. tropicalis
JGI 7.2 Xelaev16075697m.g X. laevis.L
JGI 6.0 XeXenL6RMv10020535m.g X. laevis.L
JGI 4.1 e_gw1.853.11.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_853000017 X. tropicalis
JGI 4.1 e_gw1.853.78.1 X. tropicalis
JGI 4.1 e_gw1.853.79.1 X. tropicalis
JGI 4.1 e_gw1.853.8.1 X. tropicalis
JGI 4.1 e_gw1.853.66.1 X. tropicalis
JGI 4.1 gw1.853.11.1 X. tropicalis
JGI 4.1 gw1.853.66.1 X. tropicalis
JGI 4.1 gw1.853.78.1 X. tropicalis
JGI 4.1 gw1.853.79.1 X. tropicalis
JGI 4.1 gw1.853.8.1 X. tropicalis

mRNAs based on gene models(22)

Source Version Model Species
NCBI 10.1 XBmRNA32196 X. laevis.S
NCBI 10.1 XBmRNA27397 X. laevis.L
NCBI 10.0 mRNA074297 X. tropicalis
ENSEMBL 10.0 ENSXETT00000111003 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124540 X. tropicalis
Xenbase 9.2 rna55294 X. laevis.L
JGI 9.1 Xelaev18019327m X. laevis.L
Xenbase 9.1 rna59125 X. tropicalis
JGI 9.1 Xelaev18000922m X. laevis.S
JGI 7.2 Xelaev16075697m X. laevis.L
JGI 6.0 XeXenL6RMv10020535m X. laevis.L
JGI 4.1 gw1.853.79.1 X. tropicalis
JGI 4.1 e_gw1.853.66.1 X. tropicalis
JGI 4.1 e_gw1.853.78.1 X. tropicalis
JGI 4.1 e_gw1.853.79.1 X. tropicalis
JGI 4.1 e_gw1.853.8.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_853000017 X. tropicalis
JGI 4.1 gw1.853.11.1 X. tropicalis
JGI 4.1 gw1.853.66.1 X. tropicalis
JGI 4.1 gw1.853.78.1 X. tropicalis
JGI 4.1 e_gw1.853.11.1 X. tropicalis
JGI 4.1 gw1.853.8.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:7658167 BC154105 X. tropicalis NIH_XGC_tropBrn3 brain frog
NM_001113010 X. tropicalis
PAU.10 AJ236866 X. laevis.L
NM_001085842 X. laevis.L
XM_018250606 X. laevis.L
XM_018250607 X. laevis.L
XM_018250608 X. laevis.L
XM_018239717 X. laevis.S
XM_018239718 X. laevis.S

ESTs (45)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7657188 CX828709 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655642 CX826141 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
THdA016j15 CR562293 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu102l13 AL805417 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115h20 AL794341 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu144k10 AL789659 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu044b21 AL660538 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu044c10 AL658238 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7515617 CX746456 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7564647 CX474824 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas050m19 AL649707 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7554311 CX492761 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7514615 CX744576 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7553265 CX496201 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521137 CX469122 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560244 CX516117 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7658167 CX836686 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7554311 CX492760 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7514615 CX744575 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7515617 CX746455 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7521137 CX469121 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564647 CX474823 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:4462246 BG885449 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7553265 CX496200 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560244 CX516116 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu102l13 BX694379 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115h20 BX701454 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA016j15 CR562294 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7655642 CX826140 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657188 CX828708 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658167 CX836685 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
xl259f04 DC111555 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL429f04ex BP678267 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl310i24 DC126199 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl281m02 DC118037 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl279h06 DC117385 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl224p03 DC101104 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7979723 DR716866 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xl258f04 DC111243 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4957560 BI313373 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
xlk130k10ex DC045470 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl259f04 DC076832 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl258f04 DC076546 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL429f04ex BP715292 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4957560 BI315004 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32