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Summary Expression Phenotypes Gene Literature (6) GO Terms (51) Nucleotides (476) Proteins (61) Interactants (302) Wiki
XB-GENEPAGE-5906749

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smarcc1 - All

RefSeq mRNAs(5)
Models - Gene (28)
Models - mRNA (44)
mRNAs (7)
ESTs (350)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002942718 LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1 4881 bp XP_002942764 X. tropicalis
NM_001086863 NM_001086863.1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 L homeolog 3786 bp NP_001080332 X. laevis.L
XM_041567297 XM_041567297.1 XP_041423231.1 SWI/SNF complex subunit SMARCC1-like isoform X1 4031 bp XP_041423231 X. laevis.S
XM_041567299 XM_041567299.1 XP_041423233.1 SWI/SNF complex subunit SMARCC1-like isoform X2 4027 bp XP_041423233 X. laevis.S
XM_041567300 XM_041567300.1 XP_041423234.1 SWI/SNF complex subunit SMARCC1-like isoform X3 3892 bp XP_041423234 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g26678 X. laevis.L
NCBI 10.1 XBXL10_1g28657 X. laevis.S
NCBI 10.0 XBXT10g008222 X. tropicalis
ENSEMBL 10.0 smarcc1 X. tropicalis
Xenbase 9.2 gene14782 X. laevis.L
Xenbase 9.2 gene1154 X. laevis.S
JGI 9.1 Xelaev18030524m.g X. laevis.L
JGI 9.1 Xelaev18032733m.g X. laevis.S
Xenbase 9.1 gene2412 X. tropicalis
ENSEMBL 9.1 smarcc1 X. tropicalis
JGI 8.0 Xetrov14045379m.g X. tropicalis
JGI 7.2 Xelaev16061365m.g X. laevis.L
JGI 7.1 Xetro.F01907 X. tropicalis
JGI 6.0 XeXenL6RMv10003948m.g X. laevis.L
JGI 6.0 XeXenL6RMv10040016m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014492 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10800001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_10800003 X. tropicalis
JGI 4.1 gw1.1080.23.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10800002 X. tropicalis
JGI 4.1 e_gw1.1080.23.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1080000001 X. tropicalis
JGI 4.1 gw1.1080.2.1 X. tropicalis
JGI 4.1 gw1.1080.1.1 X. tropicalis
JGI 4.1 e_gw1.1080.2.1 X. tropicalis
JGI 4.1 e_gw1.1080.1.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10800001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10800023 X. tropicalis

mRNAs based on gene models(44)

Source Version Model Species
NCBI 10.1 XBmRNA49852 X. laevis.L
NCBI 10.1 XBmRNA53839 X. laevis.S
ENSEMBL 10.0 ENSXETT00000069058 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081135 X. tropicalis
NCBI 10.0 mRNA040880 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096888 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095530 X. tropicalis
Xenbase 9.2 rna3352 X. laevis.S
Xenbase 9.2 rna43127 X. laevis.L
ENSEMBL 9.1 ENSXETT00000095296 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095530 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096888 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101855 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084032 X. tropicalis
JGI 9.1 Xelaev18032733m X. laevis.S
JGI 9.1 Xelaev18030524m X. laevis.L
Xenbase 9.1 rna8006 X. tropicalis
ENSEMBL 9.1 ENSXETT00000031732 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069058 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081135 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085043 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088945 X. tropicalis
JGI 8.0 Xetrov14045379m X. tropicalis
JGI 7.2 Xelaev16061365m X. laevis.L
JGI 7.1 Xetro.F01907.3 X. tropicalis
JGI 7.1 Xetro.F01907.5 X. tropicalis
JGI 7.1 Xetro.F01907.4 X. tropicalis
JGI 7.1 Xetro.F01907.2 X. tropicalis
JGI 7.1 Xetro.F01907.1 X. tropicalis
JGI 6.0 XeXenL6RMv10003948m X. laevis.L
JGI 6.0 XeXenL6RMv10040016m X. laevis.L
ENSEMBL 4.1 ENSXETT00000031732 X. tropicalis
JGI 4.1 e_gw1.1080.1.1 X. tropicalis
JGI 4.1 e_gw1.1080.2.1 X. tropicalis
JGI 4.1 e_gw1.1080.23.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10800001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_10800003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10800001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10800002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10800023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1080000001 X. tropicalis
JGI 4.1 gw1.1080.1.1 X. tropicalis
JGI 4.1 gw1.1080.2.1 X. tropicalis
JGI 4.1 gw1.1080.23.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
TEgg135b10 CU075511 X. tropicalis
XM_002942718 X. tropicalis
IMAGE:5570983 BC044014 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086863 X. laevis.L
XM_041567297 X. laevis.S
XM_041567299 X. laevis.S
XM_041567300 X. laevis.S

ESTs (350)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7576797 CX432286 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st18m03 DC168194 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7532684 CX433644 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537326 CX445933 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st19g04 DC168379 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7541830 CX448850 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st1b21 DC168577 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7539533 CX452183 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st1m06 DC168743 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7543448 CX459096 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543568 CX459573 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541233 CX462610 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560744 CX463761 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st24f15 DC170075 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7563950 CX474637 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st24n19 DC170201 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7564576 CX475319 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565031 CX475485 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st27k12 DC170992 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7519227 CX478481 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520501 CX480557 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545897 CX488766 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546922 CX500630 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st34g23 DC173159 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA017m05 CR420328 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6980563 CF148194 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6992414 CF242040 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7517395 CX748641 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TNeu086e05 AL805528 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123l02 AL802304 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123h01 AL802111 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu140j09 AL800978 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu090i20 AL800560 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121e18 AL799956 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu143j17 AL799116 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099o16 AL791336 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099k03 AL790237 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124h12 AL788284 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113c20 AL787639 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137d06 AL786091 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu063n06 AL784523 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065m10 AL784255 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065c06 AL777724 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070n02 AL776448 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056c07 AL677122 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061j10 AL674106 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046c09 AL658930 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu048n07 AL658819 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu032h23 AL656689 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu032d17 AL656664 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu016c06 AL642922 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu021p19 AL636272 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st3h03 DC173987 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st6j01 DC174876 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st48e24 DC178635 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st52k17 DC179648 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st64o23 DC182661 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st71p13 DC184434 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st80h08 DC186610 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st88b07 DC188451 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st90c14 DC188961 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7695194 CX923860 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7797202 DR885236 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
XZT3832 CX399447 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631764 CX397431 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610218 CX376981 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630589 CX370368 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629309 CX368670 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5309389 BQ392492 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:9014335 EL860252 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7513482 CX742858 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8892292 EL852639 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7091185 CK653904 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7094066 CK654741 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7606361 CX366289 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620037 CX347715 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7599922 CX344546 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7599897 CX344409 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787663 CX329740 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA050f02 BX727655 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA006e01 CR576528 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014f12 CR566515 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA023i05 CR435391 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA041k01 CR434027 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas003k16 AL593899 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas023c24 AL628178 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas008o06 AL628233 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas019a08 AL631640 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas020n13 AL632720 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas007c16 AL633410 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas030n05 AL647142 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033n21 AL648639 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas030h10 AL649968 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas046k10 AL650120 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044i08 AL654511 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027f19 AL655443 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas056m19 AL672398 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas061d21 AL680297 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065f12 AL682905 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12