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Summary Expression Phenotypes Gene Literature (28) GO Terms (16) Nucleotides (133) Proteins (53) Interactants (55) Wiki
XB-GENEPAGE-5913389

Show:     All X. tropicalis X. laevis

Nucleotide sequences for gtf3c1 - All

RefSeq mRNAs(3)
Models - Gene (23)
Models - mRNA (38)
mRNAs (6)
ESTs (45)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002938289 XM_002938289.5 general transcription factor 3C polypeptide 1 6449 bp XP_002938335 X. tropicalis
XM_041576502 XM_041576502.1 XP_041432436.1 general transcription factor 3C polypeptide 1 isoform X1 6806 bp XP_041432436 X. laevis.L
XM_041576503 XM_041576503.1 XP_041432437.1 general transcription factor 3C polypeptide 1 isoform X2 6803 bp XP_041432437 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g41036 X. laevis.L
NCBI 10.0 XBXT10g014017 X. tropicalis
ENSEMBL 10.0 gtf3c1 X. tropicalis
Xenbase 9.2 gene19394 X. laevis.L
JGI 9.1 Xelaev18045103m.g X. laevis.L
Xenbase 9.1 gene19518 X. tropicalis
ENSEMBL 9.1 gtf3c1 X. tropicalis
JGI 7.1 Xetro.I01080 X. tropicalis
JGI 6.0 XeXenL6RMv10012044m.g X. laevis.L
JGI 4.1 estExt_FilteredModels1.C_3570012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3570029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3570012 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_357000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_357000029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3570001 X. tropicalis
JGI 4.1 e_gw1.357.1.1 X. tropicalis
JGI 4.1 e_gw1.357.12.1 X. tropicalis
JGI 4.1 e_gw1.357.123.1 X. tropicalis
JGI 4.1 e_gw1.357.8.1 X. tropicalis
JGI 4.1 gw1.357.12.1 X. tropicalis
JGI 4.1 gw1.357.123.1 X. tropicalis
JGI 4.1 gw1.357.8.1 X. tropicalis
JGI 4.1 gw1.357.1.1 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA77417 X. laevis.L
NCBI 10.0 mRNA069391 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061050 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091180 X. tropicalis
Xenbase 9.2 rna56673 X. laevis.L
Xenbase 9.1 rna40745 X. tropicalis
JGI 9.1 Xelaev18045103m X. laevis.L
ENSEMBL 9.1 ENSXETT00000102282 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100766 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097148 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091180 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078046 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073407 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069942 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062453 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061050 X. tropicalis
JGI 7.1 Xetro.I01080.2 X. tropicalis
JGI 7.1 Xetro.I01080.4 X. tropicalis
JGI 7.1 Xetro.I01080.1 X. tropicalis
JGI 7.1 Xetro.I01080.7 X. tropicalis
JGI 7.1 Xetro.I01080.5 X. tropicalis
JGI 7.1 Xetro.I01080.6 X. tropicalis
JGI 7.1 Xetro.I01080.3 X. tropicalis
JGI 6.0 XeXenL6RMv10012044m X. laevis.L
JGI 4.1 gw1.357.8.1 X. tropicalis
JGI 4.1 gw1.357.123.1 X. tropicalis
JGI 4.1 gw1.357.12.1 X. tropicalis
JGI 4.1 gw1.357.1.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_357000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3570012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_357000029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3570001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3570012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3570029 X. tropicalis
JGI 4.1 e_gw1.357.8.1 X. tropicalis
JGI 4.1 e_gw1.357.123.1 X. tropicalis
JGI 4.1 e_gw1.357.12.1 X. tropicalis
JGI 4.1 e_gw1.357.1.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7693454 BC121317 X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7532996 BC159351 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TEgg023j19 CR942441 X. tropicalis
XM_002938289 X. tropicalis
XM_041576502 X. laevis.L
XM_041576503 X. laevis.L

ESTs (45)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8906630 EL799705 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TGas047g05 AL650857 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7532996 CX434441 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526201 CX443245 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525921 CX443271 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526223 CX443328 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526986 CX444297 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539095 CX451800 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7584671 CX415780 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7686488 CX908023 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687524 CX909297 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688301 CX910446 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690923 CX915304 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693454 CX920877 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694901 CX923458 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN12279 CX928859 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO3796 CX934403 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7707730 CX960636 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7708859 CX962623 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7718853 CX981467 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8855174 EL817723 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8856271 EL819073 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7687524 CX909296 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688301 CX910445 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8906630 EL799706 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7539095 CX451799 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7708859 CX962622 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7584671 CX415779 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN12279 CX928858 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686488 CX908022 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CABC4416 DR833236 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
CAAO3796 CX934402 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7718853 CX981466 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7690923 CX915303 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7707730 CX960635 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693454 CX920876 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8855174 EL817724 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7694901 CX923457 3' X. tropicalis NIH_XGC_tropTe4 testis frog
PBX0037F12 AW635747 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8640685 EB729178 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
PBX0036F12 AW635675 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4684141 BQ734076 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0045H08 AW636371 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
BG409622 BG409622 5' X. laevis.L Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:8640685 EB728304 3' X. laevis.L NICHD_XGC_skin_m skin unspecified stage