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Summary Expression Phenotypes Gene Literature (4) GO Terms (8) Nucleotides (205) Proteins (58) Interactants (67) Wiki
XB-GENEPAGE-5954566

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for col5a1 - All

Models - Gene (23)
Models - mRNA (33)
mRNAs (11)
ESTs (101)

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g011019 X. tropicalis
NCBI 10.1 XBXL10_1g34319 X. laevis.L
NCBI 10.1 XBXL10_1g37562 X. laevis.S
ENSEMBL 10.0 col5a1 X. tropicalis
JGI 9.1 Xelaev18038329m.g X. laevis.L
JGI 9.1 Xelaev18041554m.g X. laevis.S
Xenbase 9.1 gene25425 X. tropicalis
Xenbase 9.2 gene37398 X. laevis.L
Xenbase 9.2 gene575 X. laevis.S
ENSEMBL 9.1 col5a1 X. tropicalis
JGI 7.1 Xetro.H00056 X. tropicalis
JGI 7.2 Xelaev16012722m.g X. laevis.L
JGI 6.0 XeXenL6RMv10020987m.g X. laevis.L
JGI 6.0 XeXenL6RMv10045195m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022341 X. tropicalis
JGI 4.1 e_gw1.137.309.1 X. tropicalis
JGI 4.1 gw1.137.13.1 X. tropicalis
JGI 4.1 gw1.137.14.1 X. tropicalis
JGI 4.1 gw1.137.309.1 X. tropicalis
JGI 4.1 e_gw1.137.13.1 X. tropicalis
JGI 4.1 e_gw1.137.14.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000024 X. tropicalis

Models - mRNA (33)

Source Version Model Species
NCBI 10.0 mRNA054571 X. tropicalis
NCBI 10.1 XBmRNA64740 X. laevis.L
NCBI 10.1 XBmRNA70908 X. laevis.S
ENSEMBL 10.0 ENSXETT00000048340 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085656 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083768 X. tropicalis
JGI 9.1 Xelaev18038329m X. laevis.L
JGI 9.1 Xelaev18041554m X. laevis.S
Xenbase 9.1 rna50289 X. tropicalis
Xenbase 9.2 rna78108 X. laevis.L
Xenbase 9.2 rna1669 X. laevis.S
ENSEMBL 9.1 ENSXETT00000085656 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048340 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081127 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083768 X. tropicalis
JGI 7.1 Xetro.H00056.2 X. tropicalis
JGI 7.1 Xetro.H00056.3 X. tropicalis
JGI 7.1 Xetro.H00056.4 X. tropicalis
JGI 7.1 Xetro.H00056.5 X. tropicalis
JGI 7.1 Xetro.H00056.6 X. tropicalis
JGI 7.1 Xetro.H00056.1 X. tropicalis
JGI 7.2 Xelaev16012722m X. laevis.L
JGI 6.0 XeXenL6RMv10020987m X. laevis.L
JGI 6.0 XeXenL6RMv10045195m X. laevis.L
JGI 4.1 e_gw1.137.309.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048340 X. tropicalis
JGI 4.1 e_gw1.137.13.1 X. tropicalis
JGI 4.1 e_gw1.137.14.1 X. tropicalis
JGI 4.1 gw1.137.13.1 X. tropicalis
JGI 4.1 gw1.137.14.1 X. tropicalis
JGI 4.1 gw1.137.309.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000024 X. tropicalis

mRNAs (11)

Clone Accession Species Library Anatomy Stage
IMAGE:6997995 BC087747 X. tropicalis
IMAGE:7584785 BC135276 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XM_012969176 X. tropicalis
XM_012969175 X. tropicalis
XM_004916645 X. tropicalis
IMAGE:4679818 BC059289 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5541989 BC043799 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018232589 X. laevis.S
XM_018232588 X. laevis.S
XM_018229490 X. laevis.L
XM_041572351 X. laevis.L

ESTs (101)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8903888 EL795194 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8870890 EL713273 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8868962 EL709590 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8869155 EL709247 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8868591 EL708625 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8868312 EL708341 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st29e23 DC171469 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7786641 CX328487 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7785066 CX315781 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625309 CX402628 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622440 CX371421 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620348 CX348169 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602016 CX365780 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7647373 CX805826 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7584785 CX415849 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587944 CX314527 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586664 CX312853 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr19G08 CN101475 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA028c12 BX743088 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA056m20 BX731001 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025f03 BX729987 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:6977887 CF242464 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6982403 CF226337 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6982464 CF226300 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6982464 CF151177 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6982403 CF150484 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:8903888 EL795195 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8870890 EL713272 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8869080 EL709756 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8868962 EL709589 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8869155 EL709246 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8868591 EL708624 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8868312 EL708340 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst39n15 DC146363 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst29e23 DC141306 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7625309 CX402627 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7785066 DR904167 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622440 DR899050 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620348 DR898140 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7647373 CX805825 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7602016 CX365779 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786641 CX328486 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587944 CX314526 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586664 CX312852 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr19G08 CN101474 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA028c12 BX743089 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA056m20 BX731002 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025f03 BX729988 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xl286b12 DC119175 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl332f06 DC132766 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk62i07ex DC055034 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk68k08ex DC056985 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8545451 EB472868 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8527603 EB463639 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8543667 EB461446 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGp998L0312227 BX854199 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998J0612240 BX844650 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL110i01 BJ074012 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL097a06 BJ073441 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108i01 BJ072974 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL096a04 BJ071947 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105j17 BJ068050 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089f02 BJ067118 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL044k07 BJ040166 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL003e12 BJ030149 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6936716 CD100338 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6933922 CB943657 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6873037 CB198098 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6875658 CB200545 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6871724 CB196875 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6876079 CB200950 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6872712 CB197808 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6875151 CB200054 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6873905 CB198902 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6873657 CB198665 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6879430 CB207118 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5543116 BQ736207 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5541989 BQ736111 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5537042 BQ731522 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4679818 BI450114 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4679780 BI450107 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
rxl262o17 DC077813 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl286b12 DC084449 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl332f06 DC096781 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk68k08ex DC023559 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL097a06 BJ091391 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL110i01 BJ090910 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108i01 BJ089911 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL096a04 BJ089022 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL053k02 BJ086621 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105j17 BJ085339 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089f02 BJ084471 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL044k07 BJ054554 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL003e12 BJ045174 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6873905 CB756609 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6873905 CB756141 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6875151 CB565061 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6872712 CB564837 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6875658 CB564785 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62