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Summary Expression Gene Literature (1412) GO Terms (24) Nucleotides (123) Proteins (55) Interactants (1351) Wiki
XB-GENEPAGE-5964398

All tropicalis laevis

Nucleotide sequences for nodal3.1 - All

Models - Gene (46)
Models - mRNA (46)
Unigene Clusters (2)
Gurdon EST Clusters (2)
mRNAs (6)
ESTs (19)

Models - Gene (46)

Source Version Model Species
NCBI 10.0 XBXT10g011008 X. tropicalis
Xenbase 9.1 gene417 X. tropicalis
Xenbase 9.2 gene36628 X. laevis.L
JGI 9.1 Xelaev18018866m.g X. laevis.L
JGI 8.0 Xetrov14012272m.g X. tropicalis
JGI 7.1 Xetro.C00176 X. tropicalis
JGI 7.2 Xelaev16020569m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023904m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023906m.g X. laevis.L
JGI 4.1 e_gw1.34.460.1 X. tropicalis
ENSEMBL 4.1 ENSXETG00000009009 X. tropicalis
JGI 4.1 e_gw1.34.455.1 X. tropicalis
JGI 4.1 e_gw1.34.456.1 X. tropicalis
JGI 4.1 e_gw1.34.463.1 X. tropicalis
JGI 4.1 e_gw1.34.466.1 X. tropicalis
JGI 4.1 e_gw1.34.468.1 X. tropicalis
JGI 4.1 e_gw1.34.472.1 X. tropicalis
JGI 4.1 e_gw1.34.475.1 X. tropicalis
JGI 4.1 e_gw1.34.477.1 X. tropicalis
JGI 4.1 gw1.34.455.1 X. tropicalis
JGI 4.1 gw1.34.456.1 X. tropicalis
JGI 4.1 gw1.34.460.1 X. tropicalis
JGI 4.1 gw1.34.463.1 X. tropicalis
JGI 4.1 gw1.34.466.1 X. tropicalis
JGI 4.1 gw1.34.468.1 X. tropicalis
JGI 4.1 gw1.34.472.1 X. tropicalis
JGI 4.1 gw1.34.475.1 X. tropicalis
JGI 4.1 gw1.34.477.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_340133 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340455 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340456 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340460 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340463 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340466 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340468 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340472 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340475 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340477 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_340038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340157 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340158 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_340064 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_34000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000159 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000160 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_34000065 X. tropicalis

Models - mRNA (46)

Source Version Model Species
NCBI 10.0 mRNA054531 X. tropicalis
JGI 9.1 Xelaev18018866m X. laevis.L
Xenbase 9.2 rna77028 X. laevis.L
Xenbase 9.1 rna1303 X. tropicalis
JGI 8.0 Xetrov14012272m X. tropicalis
JGI 7.1 Xetro.C00176.1 X. tropicalis
JGI 7.2 Xelaev16020569m X. laevis.L
JGI 6.0 XeXenL6RMv10023904m X. laevis.L
JGI 6.0 XeXenL6RMv10023906m X. laevis.L
JGI 4.1 e_gw1.34.460.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000019730 X. tropicalis
JGI 4.1 e_gw1.34.455.1 X. tropicalis
JGI 4.1 e_gw1.34.456.1 X. tropicalis
JGI 4.1 e_gw1.34.463.1 X. tropicalis
JGI 4.1 e_gw1.34.466.1 X. tropicalis
JGI 4.1 e_gw1.34.468.1 X. tropicalis
JGI 4.1 e_gw1.34.472.1 X. tropicalis
JGI 4.1 e_gw1.34.475.1 X. tropicalis
JGI 4.1 e_gw1.34.477.1 X. tropicalis
JGI 4.1 gw1.34.455.1 X. tropicalis
JGI 4.1 gw1.34.456.1 X. tropicalis
JGI 4.1 gw1.34.460.1 X. tropicalis
JGI 4.1 gw1.34.463.1 X. tropicalis
JGI 4.1 gw1.34.466.1 X. tropicalis
JGI 4.1 gw1.34.468.1 X. tropicalis
JGI 4.1 gw1.34.472.1 X. tropicalis
JGI 4.1 gw1.34.475.1 X. tropicalis
JGI 4.1 gw1.34.477.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_340133 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340455 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340456 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340460 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340463 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340466 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340468 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340472 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340475 X. tropicalis
JGI 4.1 estExt_Genewise1.C_340477 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_340038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340157 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_340158 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_340064 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_34000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000159 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_34000160 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_34000065 X. tropicalis

Gurdon EST Clusters (2)

ID Species
1012100798 X. tropicalis
1012786349 X. laevis.L

mRNAs (6)

Clone Accession Species Library Anatomy Stage
NM_203533 X. tropicalis
AB093328 X. tropicalis
IMAGE:9041325 BC169691 X. laevis.L
IMAGE:9041323 BC169689 X. laevis.L
NM_001085790 X. laevis.L
U25993 X. laevis.L

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
nodal3.1-HAR53 BG886280 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xlk71g22ex DC058193 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
DN828650 DN828650 5' X. laevis.L LiCl-dorsalized gastrula cDNA expression library whole organism NF stage 11
IMAGE:7297499 CO384289 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGp998B249034 BX852363 5' X. laevis.L Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
XL211b02 BJ625275 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189n03 BJ619603 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL185d18 BJ618485 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL178i11 BJ616865 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168l01 BJ614593 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3749303 BF615399 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:7297499 CO384309 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL211b02 BJ641734 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189n03 BJ636237 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL186d18 BJ635295 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL185d18 BJ635051 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL178i11 BJ633387 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168l01 BJ631287 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL157a19 BJ628512 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5