Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (9) Nucleotides (85) Proteins (41) Interactants (39) Wiki
XB-GENEPAGE-5997985

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxc3 - All

RefSeq mRNAs(5)
Models - Gene (27)
Models - mRNA (27)
mRNAs (6)
ESTs (14)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002936650 XM_002936650.4 homeobox protein Hox-D3a 2294 bp XP_002936696 X. tropicalis
XM_004911932 XM_004911932.4 homeobox protein Hox-D3a 2493 bp XP_004911989 X. tropicalis
XM_031897192 XM_031897192.1 XP_031753052.1 homeobox protein Hox-D3a 2495 bp XP_031753052 X. tropicalis
XM_018247550 XM_018247550.2 homeobox protein Hox-D3-like 2772 bp XP_018103039 X. laevis.L
XM_018250128 XM_018250128.2 homeobox protein Hox-D3-like 2521 bp XP_018105617 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g10835 X. laevis.S
NCBI 10.1 XBXL10_1g8240 X. laevis.L
NCBI 10.0 XBXT10g000827 X. tropicalis
ENSEMBL 10.0 hoxc3 X. tropicalis
Xenbase 9.2 gene15119 X. laevis.S
Xenbase 9.2 gene15780 X. laevis.L
JGI 9.1 Xelaev18016018m.g X. laevis.S
JGI 9.1 Xelaev18013557m.g X. laevis.L
Xenbase 9.1 gene3822 X. tropicalis
ENSEMBL 9.1 hoxc3 X. tropicalis
JGI 7.1 Xetro.B01499 X. tropicalis
JGI 6.0 XeXenL6RMv10010309m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000025181 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260019 X. tropicalis
JGI 4.1 e_gw1.226.132.1 X. tropicalis
JGI 4.1 e_gw1.226.6.1 X. tropicalis
JGI 4.1 e_gw1.226.69.1 X. tropicalis
JGI 4.1 gw1.226.132.1 X. tropicalis
JGI 4.1 gw1.226.6.1 X. tropicalis
JGI 4.1 gw1.226.69.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260069 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260132 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000019 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA20379 X. laevis.S
NCBI 10.1 XBmRNA15579 X. laevis.L
ENSEMBL 10.0 ENSXETT00000053914 X. tropicalis
NCBI 10.0 mRNA004119 X. tropicalis
Xenbase 9.2 rna44129 X. laevis.S
Xenbase 9.2 rna46102 X. laevis.L
Xenbase 9.1 rna12472 X. tropicalis
JGI 9.1 Xelaev18016018m X. laevis.S
JGI 9.1 Xelaev18013557m X. laevis.L
ENSEMBL 9.1 ENSXETT00000053914 X. tropicalis
JGI 7.1 Xetro.B01499.1 X. tropicalis
JGI 6.0 XeXenL6RMv10010309m X. laevis.L
JGI 4.1 estExt_Genewise1.C_2260006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260019 X. tropicalis
JGI 4.1 e_gw1.226.69.1 X. tropicalis
JGI 4.1 e_gw1.226.6.1 X. tropicalis
JGI 4.1 e_gw1.226.132.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053914 X. tropicalis
JGI 4.1 gw1.226.69.1 X. tropicalis
JGI 4.1 gw1.226.6.1 X. tropicalis
JGI 4.1 gw1.226.132.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260132 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260069 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
TTpA019d07 CU075877 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XM_002936650 X. tropicalis
XM_004911932 X. tropicalis
XM_031897192 X. tropicalis
XM_018247550 X. laevis.L
XM_018250128 X. laevis.S

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
xthr44M18 CN116416 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu082d05 AL780082 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6980365 CF150160 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA007j07 CR410349 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA003n21 CR562625 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA019d07 BX710843 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA026h13 BX742742 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu024b17 AL642094 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA019d07 BX710844 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr44M18 CN116415 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA007j07 CR410350 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA026h13 BX742743 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr17K12 CN100237 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7978865 DR721501 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19