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Summary Expression Phenotypes Gene Literature (0) GO Terms (19) Nucleotides (99) Proteins (54) Interactants (208) Wiki
XB-GENEPAGE-6087244

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trim55 - All

RefSeq mRNAs(9)
Models - Gene (24)
Models - mRNA (26)
mRNAs (10)
ESTs (19)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
XM_004915175 XM_004915175.4 tripartite motif-containing protein 55 isoform X1 2760 bp XP_004915232 X. tropicalis
XM_004915176 XM_004915176.4 tripartite motif-containing protein 55 isoform X2 1856 bp XP_004915233 X. tropicalis
XM_004915177 XM_004915177.4 tripartite motif-containing protein 55 isoform X3 2192 bp XP_004915234 X. tropicalis
XM_004915178 XM_004915178.4 tripartite motif-containing protein 55 isoform X4 2470 bp XP_004915235 X. tropicalis
XM_031903834 XM_031903834.1 XP_031759694.1 tripartite motif-containing protein 55 isoform X5 2431 bp XP_031759694 X. tropicalis
NM_001097700 NM_001097700.1 uncharacterized protein LOC100036929 1907 bp NP_001091169 X. laevis.L
XM_018266114 XM_018266114.2 uncharacterized protein LOC100036929 isoform X1 2220 bp XP_018121603 X. laevis.L
XM_041565189 XM_041565189.1 XP_041421123.1 uncharacterized protein LOC100036929 isoform X2 1842 bp XP_041421123 X. laevis.L
XM_018223761 XM_018223761.2 tripartite motif-containing protein 55 2438 bp XP_018079250 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g27992 X. laevis.L
NCBI 10.1 XBXL10_1g29582 X. laevis.S
NCBI 10.0 XBXT10g019694 X. tropicalis
ENSEMBL 10.0 trim55 X. tropicalis
Xenbase 9.2 gene11282 X. laevis.L
Xenbase 9.2 gene1585 X. laevis.S
JGI 9.1 Xelaev18032075m.g X. laevis.L
JGI 9.1 Xelaev18033768m.g X. laevis.S
Xenbase 9.1 gene21605 X. tropicalis
ENSEMBL 9.1 trim55 X. tropicalis
JGI 8.0 Xetrov14046445m.g X. tropicalis
JGI 7.2 Xelaev16063537m.g X. laevis.L
JGI 7.1 Xetro.F00419 X. tropicalis
JGI 6.0 XeXenL6RMv10018003m.g X. laevis.L
JGI 6.0 XeXenL6RMv10015869m.g X. laevis.L
JGI 4.1 gw1.637.4.1 X. tropicalis
JGI 4.1 gw1.637.29.1 X. tropicalis
JGI 4.1 gw1.637.28.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_637000005 X. tropicalis
JGI 4.1 e_gw1.637.4.1 X. tropicalis
JGI 4.1 e_gw1.637.29.1 X. tropicalis
ENSEMBL 4.1 ENSXETG00000020286 X. tropicalis
JGI 4.1 e_gw1.637.28.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_637000014 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.1 XBmRNA52565 X. laevis.L
NCBI 10.1 XBmRNA55692 X. laevis.S
ENSEMBL 10.0 ENSXETT00000043769 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115040 X. tropicalis
NCBI 10.0 mRNA097184 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107558 X. tropicalis
Xenbase 9.2 rna32811 X. laevis.L
Xenbase 9.2 rna4635 X. laevis.S
JGI 9.1 Xelaev18033768m X. laevis.S
ENSEMBL 9.1 ENSXETT00000043769 X. tropicalis
Xenbase 9.1 rna44153 X. tropicalis
JGI 9.1 Xelaev18032075m X. laevis.L
JGI 8.0 Xetrov14046445m X. tropicalis
JGI 7.2 Xelaev16063537m X. laevis.L
JGI 7.1 Xetro.F00419.1 X. tropicalis
JGI 6.0 XeXenL6RMv10015869m X. laevis.L
JGI 6.0 XeXenL6RMv10018003m X. laevis.L
JGI 4.1 e_gw1.637.28.1 X. tropicalis
JGI 4.1 e_gw1.637.4.1 X. tropicalis
JGI 4.1 gw1.637.28.1 X. tropicalis
JGI 4.1 gw1.637.4.1 X. tropicalis
JGI 4.1 gw1.637.29.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_637000005 X. tropicalis
JGI 4.1 e_gw1.637.29.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_637000014 X. tropicalis
JGI 4.1 ENSXETT00000043769 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
XM_004915175 X. tropicalis
XM_004915176 X. tropicalis
XM_004915177 X. tropicalis
XM_004915178 X. tropicalis
XM_031903834 X. tropicalis
IMAGE:8543003 BC129678 X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
NM_001097700 X. laevis.L
XM_018266114 X. laevis.L
XM_041565189 X. laevis.L
XM_018223761 X. laevis.S

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8906020 EL798455 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TTbA079c10 CR439377 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8906020 EL798456 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
XL022f14 BJ033623 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8545289 EB472995 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL012p16 BJ029610 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL013m06 BJ029858 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8543003 EB469387 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL064g04 BJ059953 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL056j04 BJ070440 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098g02 BJ072360 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071g07 BJ074770 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098g02 BJ089384 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL064g04 BJ092183 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL013m06 BJ044574 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL071g07 BJ081360 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL012p16 BJ044331 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL052f22 BJ086212 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL056j04 BJ087471 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25