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Summary Expression Phenotypes Gene Literature (1) GO Terms (14) Nucleotides (171) Proteins (48) Interactants (10) Wiki
XB-GENEPAGE-852607

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rnf11 - All

RefSeq mRNAs(4)
Models - Gene (27)
Models - mRNA (29)
mRNAs (10)
ESTs (62)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001016437 NM_001016437.2 RING finger protein 11 1906 bp NP_001016437 X. tropicalis
NM_001086962 NM_001086962.1 ring finger protein 11 L homeolog 2365 bp NP_001080431 X. laevis.L
XM_018256491 XM_018256491.2 ring finger protein 11 L homeolog isoform X1 2557 bp XP_018111980 X. laevis.L
XM_018260882 XM_018260882.2 RING finger protein 11 1420 bp XP_018116371 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g19242 X. laevis.L
NCBI 10.1 XBXL10_1g21700 X. laevis.S
NCBI 10.0 XBXT10g008722 X. tropicalis
ENSEMBL 10.0 rnf11 X. tropicalis
Xenbase 9.2 gene1514 X. laevis.L
Xenbase 9.2 gene17427 X. laevis.S
JGI 9.1 Xelaev18023165m.g X. laevis.L
JGI 9.1 Xelaev18025266m.g X. laevis.S
Xenbase 9.1 gene5021 X. tropicalis
ENSEMBL 9.1 rnf11 X. tropicalis
JGI 8.0 Xetrov14019287m.g X. tropicalis
JGI 7.2 Xelaev16061029m.g X. laevis.L
JGI 7.1 Xetro.D01972 X. tropicalis
JGI 6.0 XeXenL6RMv10008646m.g X. laevis.L
JGI 6.0 XeXenL6RMv10008680m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000002837 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1000016 X. tropicalis
JGI 4.1 gw1.1.462.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000117 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000118 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1000027 X. tropicalis
JGI 4.1 gw1.1.332.1 X. tropicalis
JGI 4.1 gw1.1.26.1 X. tropicalis
JGI 4.1 e_gw1.1.462.1 X. tropicalis
JGI 4.1 e_gw1.1.332.1 X. tropicalis
JGI 4.1 e_gw1.1.26.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1000035 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA40226 X. laevis.S
NCBI 10.1 XBmRNA35552 X. laevis.L
ENSEMBL 10.0 ENSXETT00000006199 X. tropicalis
NCBI 10.0 mRNA043225 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119246 X. tropicalis
Xenbase 9.2 rna4405 X. laevis.L
Xenbase 9.2 rna50895 X. laevis.S
Xenbase 9.1 rna16358 X. tropicalis
JGI 9.1 Xelaev18025266m X. laevis.S
JGI 9.1 Xelaev18023165m X. laevis.L
ENSEMBL 9.1 ENSXETT00000090570 X. tropicalis
ENSEMBL 9.1 ENSXETT00000006199 X. tropicalis
JGI 8.0 Xetrov14019287m X. tropicalis
JGI 7.2 Xelaev16061029m X. laevis.L
JGI 7.1 Xetro.D01972.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008680m X. laevis.L
JGI 6.0 XeXenL6RMv10008646m X. laevis.L
JGI 4.1 gw1.1.462.1 X. tropicalis
JGI 4.1 gw1.1.26.1 X. tropicalis
JGI 4.1 gw1.1.332.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1000035 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000118 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1000027 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000117 X. tropicalis
JGI 4.1 e_gw1.1.462.1 X. tropicalis
JGI 4.1 e_gw1.1.332.1 X. tropicalis
JGI 4.1 e_gw1.1.26.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006199 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7552275 BC157292 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9040157 BC170899 X. tropicalis
IMAGE:9040161 BC170903 X. tropicalis
TEgg073f03 CR761033 X. tropicalis
NM_001016437 X. tropicalis
IMAGE:4887870 BC043736 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
IMAGE:7207751 BC108492 X. laevis.L
NM_001086962 X. laevis.L
XM_018256491 X. laevis.L
XM_018260882 X. laevis.S

ESTs (62)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA032j11 BX717763 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8903300 EL794216 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TNeu087f18 AL805211 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053h18 AL673070 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA033f06 BX732157 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu026h18 AL644343 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029p03 AL646778 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas068i21 AL683678 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144m10 AL968755 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7564506 CX475166 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535171 CX475963 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548716 CX491160 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552275 CX494335 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA011l13 BX704156 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8962781 EL661710 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7610920 CX377792 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7672059 CX880085 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA011l13 BX704157 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA033f06 BX732158 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7672059 CX880084 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8903300 EL794217 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TGas144m10 BX761733 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7564506 CX475165 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA032j09 BX717762 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7610920 CX377791 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7535171 CX475962 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu053h18 BX684445 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7552275 CX494334 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas068i21 BX746992 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XL409k24ex BP710230 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5162035 BQ398010 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGp998B2011402 BX849865 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:3401373 BE669233 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6863666 CA987099 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL182i09 BJ617833 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL186g16 BJ618753 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197i13 BJ621464 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL204h13 BJ623386 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl254f06 DC110069 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl270n13 DC114975 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl271n13 DC115269 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl291d22 DC120686 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL420d18ex BP675867 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL492e20ex BP707720 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk117p07ex DC041319 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk130h03ex DC045402 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL038n20 BJ039898 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7978353 DR725227 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL420d18ex BP713264 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5162035 BQ398009 3' X. laevis.L Soares NXEG egg unfertilized egg stage
XL038n20 BJ053447 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4783504 BM191845 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl291d22 DC085903 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl271n13 DC080356 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl270n13 DC080078 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl254f06 DC075436 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL204h13 BJ640036 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197i13 BJ638189 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182i09 BJ634363 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3401373 BE575847 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxlk117p07ex DC008423 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL409k24ex BP742065 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5