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Summary Expression Phenotypes Gene Literature (6) GO Terms (28) Nucleotides (160) Proteins (47) Interactants (283) Wiki
XB-GENEPAGE-853020

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tgif1 - All

RefSeq mRNAs(5)
Models - Gene (25)
Models - mRNA (27)
mRNAs (8)
ESTs (81)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_204051 NM_204051.1 homeobox protein TGIF1 2042 bp NP_989382 X. tropicalis
XM_012964471 XM_012964471.3 homeobox protein TGIF1 isoform X1 2007 bp XP_012819925 X. tropicalis
XM_012964472 XM_012964472.3 homeobox protein TGIF1 isoform X2 1802 bp XP_012819926 X. tropicalis
NM_001086951 NM_001086951.1 TGFB induced factor homeobox 1 S homeolog 1827 bp NP_001080420 X. laevis.S
XM_018267912 XM_018267912.2 homeobox protein AKR 2214 bp XP_018123401 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g29470 X. laevis.S
NCBI 10.1 XBXL10_1g27817 X. laevis.L
NCBI 10.0 XBXT10g007780 X. tropicalis
ENSEMBL 10.0 tgif1 X. tropicalis
Xenbase 9.2 gene13818 X. laevis.L
Xenbase 9.2 gene7457 X. laevis.S
JGI 9.1 Xelaev18031876m.g X. laevis.L
JGI 9.1 Xelaev18033618m.g X. laevis.S
Xenbase 9.1 gene4121 X. tropicalis
JGI 8.0 Xetrov14026004m.g X. tropicalis
JGI 7.2 Xelaev16039724m.g X. laevis.S
JGI 7.1 Xetro.F00604 X. tropicalis
JGI 6.0 XeXenL6RMv10041233m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000025010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_337000024 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_337000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_337000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_337000023 X. tropicalis
JGI 4.1 gw1.337.31.1 X. tropicalis
JGI 4.1 gw1.337.30.1 X. tropicalis
JGI 4.1 e_gw1.337.43.1 X. tropicalis
JGI 4.1 e_gw1.337.31.1 X. tropicalis
JGI 4.1 e_gw1.337.30.1 X. tropicalis
JGI 4.1 gw1.337.43.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_337000007 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA52245 X. laevis.L
NCBI 10.1 XBmRNA55435 X. laevis.S
ENSEMBL 10.0 ENSXETT00000114298 X. tropicalis
NCBI 10.0 mRNA038555 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116217 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123827 X. tropicalis
Xenbase 9.2 rna21732 X. laevis.S
Xenbase 9.2 rna40242 X. laevis.L
Xenbase 9.1 rna13450 X. tropicalis
JGI 9.1 Xelaev18031876m X. laevis.L
JGI 9.1 Xelaev18033618m X. laevis.S
JGI 8.0 Xetrov14026004m X. tropicalis
JGI 7.2 Xelaev16039724m X. laevis.S
JGI 7.1 Xetro.F00604.1 X. tropicalis
JGI 6.0 XeXenL6RMv10041233m X. laevis.S
JGI 4.1 e_gw1.337.30.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000013242 X. tropicalis
JGI 4.1 gw1.337.43.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_337000001 X. tropicalis
JGI 4.1 gw1.337.30.1 X. tropicalis
JGI 4.1 gw1.337.31.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_337000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_337000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_337000024 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_337000002 X. tropicalis
JGI 4.1 e_gw1.337.43.1 X. tropicalis
JGI 4.1 e_gw1.337.31.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:5382716 BC064716 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu055p01 CR848339 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_204051 X. tropicalis
XM_012964471 X. tropicalis
XM_012964472 X. tropicalis
IMAGE:5571016 BC044016 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086951 X. laevis.S
XM_018267912 X. laevis.L

ESTs (81)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8912248 EL808485 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TGas103l11 AL958379 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132j07 AL969150 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7541107 CX462726 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522730 CX472110 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549834 CX485589 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546808 CX500498 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu024a04 AL642263 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu017c07 AL643108 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu028b07 AL646613 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu034e02 AL657195 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu055p01 AL676931 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu054h02 AL678966 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu125j16 AL789154 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu104g23 AL795908 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5382716 BQ393853 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5378971 BQ522702 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA007o21 CR409241 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011n05 CR410253 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA002p20 CR410534 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA077j15 CR429174 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA054d11 CR436040 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA038f20 CR573395 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA052o03 CR580189 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA064c16 BX733089 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA071p06 BX738276 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA031a17 BX738765 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7787196 CX329512 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598931 CX343303 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8928107 EL676302 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xthr12I12 CN097029 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu124p19 BX698969 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu125j16 BX702562 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5382716 BQ393852 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7598931 CX343302 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787196 CX329511 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA071p06 BX738277 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7522730 CX472109 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541107 CX462725 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas132j07 BX761248 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA077j15 CR429175 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas103l11 BX754545 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu055p01 BX688776 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5378971 BQ522701 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTpA064c16 BX733090 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu054h02 BX689221 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7546808 CX500497 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA011n05 CR410254 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7549834 CX485588 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA002p20 CR410535 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr12I12 CN097028 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8912248 EL808486 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
XL080k21 BJ064772 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL092p12 BJ071085 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL004g03 BJ030514 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8321166 DY569136 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:6879354 CB180773 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5154915 CA792105 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL143l24 BJ093868 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL202m10 BJ622918 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL203i22 BJ623145 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL208a10 BJ624293 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL212l19 BJ625807 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL104g07 BJ057552 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054d18 BJ069671 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3581725 BG656810 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
xlk119c18ex DC041708 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5571016 BQ734875 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL082g12 BJ065248 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106g19 BJ068332 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3581725 BG552260 3' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:6879354 CB560666 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL080k21 BJ076425 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl221c10 DC082073 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL092p12 BJ088412 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL208a10 BJ640855 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL203i22 BJ639820 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl284p23 DC084194 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL202m10 BJ639604 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL004g03 BJ045503 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL082g12 BJ087710 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25