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Summary Expression Gene Literature (22) GO Terms (24) Nucleotides (172) Proteins (34) Interactants (763) Wiki
XB-GENEPAGE-853253

All tropicalis laevis

Nucleotide sequences for prdm1 - All

Models - Gene (25)
Models - mRNA (21)
Unigene Clusters (3)
Gurdon EST Clusters (2)
mRNAs (14)
ESTs (100)

Models - Gene (25)

Source Version Model Species
Xenbase 9.1 gene1672 tropicalis
JGI 9.1 Xelaev18029311m.g laevis.S
JGI 9.1 Xelaev18027228m.g laevis.L
JGI 8.0 Xetrov14022963m.g tropicalis
JGI 7.1 Xetro.E00631 tropicalis
JGI 7.2 Xelaev16075537m.g laevis.S
JGI 6.0 XeXenL6RMv10030164m.g laevis.S
JGI 4.1 estExt_Genewise1.C_2690070 tropicalis
ENSEMBL 4.1 ENSXETG00000008674 tropicalis
JGI 4.1 e_gw1.269.56.1 tropicalis
JGI 4.1 e_gw1.269.63.1 tropicalis
JGI 4.1 e_gw1.269.70.1 tropicalis
JGI 4.1 e_gw1.269.72.1 tropicalis
JGI 4.1 gw1.269.56.1 tropicalis
JGI 4.1 gw1.269.63.1 tropicalis
JGI 4.1 gw1.269.70.1 tropicalis
JGI 4.1 gw1.269.72.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_2690004 tropicalis
JGI 4.1 estExt_Genewise1.C_2690056 tropicalis
JGI 4.1 estExt_Genewise1.C_2690063 tropicalis
JGI 4.1 estExt_Genewise1.C_2690072 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2690007 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2690001 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_269000007 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_269000001 tropicalis

Models - mRNA (21)

Source Version Model Species
Xenbase 9.1 rna5476 tropicalis
JGI 8.0 Xetrov14022963m tropicalis
JGI 7.1 Xetro.E00631.1 tropicalis
JGI 4.1 estExt_Genewise1.C_2690070 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_269000001 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_269000007 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2690001 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2690007 tropicalis
JGI 4.1 estExt_Genewise1.C_2690072 tropicalis
JGI 4.1 estExt_Genewise1.C_2690063 tropicalis
JGI 4.1 estExt_Genewise1.C_2690056 tropicalis
JGI 4.1 estExt_FilteredModels1.C_2690004 tropicalis
JGI 4.1 gw1.269.72.1 tropicalis
JGI 4.1 gw1.269.70.1 tropicalis
JGI 4.1 gw1.269.63.1 tropicalis
JGI 4.1 gw1.269.56.1 tropicalis
JGI 4.1 e_gw1.269.72.1 tropicalis
JGI 4.1 e_gw1.269.70.1 tropicalis
JGI 4.1 e_gw1.269.63.1 tropicalis
JGI 4.1 e_gw1.269.56.1 tropicalis
ENSEMBL 4.1 ENSXETT00000018988 tropicalis

Unigene Clusters (3)

ID Species
Str.27139 tropicalis
Xl.8351 laevis.S
Xl.40621 laevis.S

Gurdon EST Clusters (2)

ID Species
1012153839 tropicalis
1012779283 laevis.S

mRNAs (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7027443 BC080145 tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
XM_002937157 tropicalis
XM_012963549 tropicalis
XM_004914548 tropicalis
IMAGE:4202876 BC060348 laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542152 BC044261 laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
AF182280 laevis.S
AJ009296 laevis.S
NM_001087104 laevis.S
XM_018264248 laevis.S
XM_018264247 laevis.S
XM_018263354 laevis.L
XM_018263353 laevis.L
XM_018263352 laevis.L

ESTs (100)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8888093 EL845761 5' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8935659 EL637041 5' tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7625554 CX378607 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578893 CX417342 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7597971 CX386978 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7541498 CX448225 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541531 CX463309 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537492 CX446715 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7798914 DN059731 5' tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7517099 CX748595 5' tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
THdA047p20 CR589724 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA072n20 CR440333 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA042e23 CR432771 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018e20 CR417246 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA006d15 CR414136 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas109k17 AL962747 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120n13 AL960665 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120f05 AL960624 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049g17 AL649398 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu105l10 AL786455 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas058d06 AL680215 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu033o22 AL655873 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7027443 CF784176 5' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8888093 EL845762 3' tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8935659 EL637040 3' tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7597971 DR891795 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7798914 DN059730 3' tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7517099 CX748594 3' tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7541531 CX463308 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541498 CX448224 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537492 CX446714 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578893 CX417341 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7625554 CX378606 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA047p20 CR589725 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA042e23 CR432772 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018e20 CR417247 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA006d15 CR414137 3' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas115b08 BX762341 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120n13 BX759724 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120f05 BX757138 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu076n09 BX699117 3' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7027443 CF784175 3' tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xl323d20 DC129975 5' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk140b22ex DC048533 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk147n15ex DC051046 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk159k20ex DC063978 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk70i11ex DC057905 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk70c04ex DC057774 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk70a19ex DC057746 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk129b13ex DC044958 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk115p02ex DC040699 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk161k17ex DC064629 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk56c17ex DC034433 5' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL457f13ex BP688419 5' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL455e21ex BP687772 5' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL464k24ex BP691477 5' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL446o19ex BP684780 5' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL511n07ex BP704424 5' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998I0314214 BX846564 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL216l08 BJ627011 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL216f12 BJ626896 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL198i20 BJ621754 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL178o04 BJ616956 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172m24 BJ615614 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170c10 BJ614971 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL142e11 BJ093390 5' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL108o19 BJ073103 5' laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL026c08 BJ034061 5' laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5513983 CF286570 5' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6637323 BU911357 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5542152 BQ735153 5' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4202876 BG552673 5' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3402692 BG364004 5' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XENOPUS_SOURCE_ID:xlnoc001p07 AW147785 5' laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl323d20 DC094163 3' laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk161k17ex DC031096 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk159k20ex DC030465 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk129b13ex DC011800 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk147n15ex DC017708 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk70i11ex DC024487 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk70c04ex DC024352 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk70a19ex DC024325 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk56c17ex DC001619 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk140b22ex DC015273 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk115p02ex DC007788 3' laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL511n07ex BP737238 3' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL464k24ex BP725940 3' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL446o19ex BP720661 3' laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL216f12 BJ643248 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL198i20 BJ638458 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL178o04 BJ633464 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172m24 BJ632241 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170c10 BJ631652 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL161m14 BJ629534 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL142e11 BJ097591 3' laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL026c08 BJ049441 3' laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4202876 BG579390 3' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3402692 BG020363 3' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3401160 BE575837 3' laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
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