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Summary Expression Phenotypes Gene Literature (7) GO Terms (23) Nucleotides (139) Proteins (48) Interactants (137) Wiki
XB-GENEPAGE-853353

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pou3f1 - All

RefSeq mRNAs(3)
Models - Gene (33)
Models - mRNA (33)
mRNAs (10)
ESTs (48)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016504 NM_001016504.2 POU domain, class 3, transcription factor 1 2538 bp NP_001016504 X. tropicalis
NM_001103185 NM_001103185.1 POU domain, class 3, transcription factor 1-B 3055 bp NP_001096655 X. laevis.L
NM_001164582 NM_001164582.2 POU domain, class 3, transcription factor 1-A 1331 bp NP_001158054 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g9998 X. laevis.S
NCBI 10.1 XBXL10_1g6861 X. laevis.L
NCBI 10.0 XBXT10g008308 X. tropicalis
Xenbase 9.2 gene48349 X. laevis.L
Xenbase 9.2 gene37913 X. laevis.S
JGI 9.1 Xelaev18012044m.g X. laevis.L
JGI 9.1 Xelaev18003202m.g X. laevis.S
Xenbase 9.1 gene21369 X. tropicalis
JGI 7.2 Xelaev16009023m.g X. laevis.L
JGI 7.2 Xelaev16021336m.g X. laevis.S
JGI 7.1 Xetro.B00070 X. tropicalis
JGI 6.0 XeXenL6RMv10011477m.g X. laevis.L
JGI 6.0 XeXenL6RMv10028477m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000011510 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_422000001 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4220001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_422000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_422000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_422000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_422000001 X. tropicalis
JGI 4.1 e_gw1.422.24.1 X. tropicalis
JGI 4.1 e_gw1.422.25.1 X. tropicalis
JGI 4.1 e_gw1.422.27.1 X. tropicalis
JGI 4.1 gw1.422.24.1 X. tropicalis
JGI 4.1 gw1.422.25.1 X. tropicalis
JGI 4.1 gw1.422.27.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4220006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4220024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4220025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4220027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4220015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4220016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4220002 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA18673 X. laevis.S
NCBI 10.1 XBmRNA12858 X. laevis.L
NCBI 10.0 mRNA041333 X. tropicalis
Xenbase 9.2 rna78850 X. laevis.S
Xenbase 9.2 rna93906 X. laevis.L
JGI 9.1 Xelaev18012044m X. laevis.L
Xenbase 9.1 rna43717 X. tropicalis
JGI 9.1 Xelaev18003202m X. laevis.S
JGI 7.2 Xelaev16009023m X. laevis.L
JGI 7.2 Xelaev16021336m X. laevis.S
JGI 7.1 Xetro.B00070.1 X. tropicalis
JGI 6.0 XeXenL6RMv10028477m X. laevis.S
JGI 6.0 XeXenL6RMv10011477m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_422000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_422000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_422000002 X. tropicalis
JGI 4.1 e_gw1.422.24.1 X. tropicalis
JGI 4.1 gw1.422.24.1 X. tropicalis
JGI 4.1 gw1.422.25.1 X. tropicalis
JGI 4.1 gw1.422.27.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_422000001 X. tropicalis
JGI 4.1 e_gw1.422.25.1 X. tropicalis
JGI 4.1 e_gw1.422.27.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025161 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4220001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4220015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4220016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4220002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4220006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4220024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4220025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4220027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_422000001 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:6998701 BC098088 X. tropicalis
TTpA009b07 CR760792 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
NM_001016504 X. tropicalis
IMAGE:6948867 BC093556 X. laevis.L
NM_001103185 X. laevis.L
X54682 X. laevis.L
X54684 X. laevis.L
IMAGE:4888100 BC043847 X. laevis.S NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
NM_001164582 X. laevis.S
X59056 X59056 X. laevis.S

ESTs (48)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA040g11 CR580073 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8890512 EL850652 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7707995 CX961183 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA009b07 BX708911 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8864142 EL700758 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
TTpA056o18 BX731017 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7631912 CX397981 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA073h02 BX735720 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:6994790 CF239873 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTpA075j13 BX739527 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7610632 CX377323 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623370 CX372676 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu048l21 AL658815 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA073f21 CR435946 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st89h18 DC188803 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA057c12 CR442384 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st90h18 DC189037 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA034o02 CR443396 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA040g16 CR575710 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st91h18 DC189291 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA032f24 CR578464 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st92h18 DC189519 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA051h18 CR579699 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st93h18 DC189752 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7707995 CX961182 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA073f21 CR435947 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA057c12 CR442385 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA040g16 CR575711 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032f24 CR578465 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA051h18 CR579700 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040g11 CR580074 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA018e11 BX702993 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA009b07 BX708912 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA056o18 BX731018 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA073h02 BX735721 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7623370 CX372675 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610632 CX377322 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631912 CX397980 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7979891 DR723985 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL416p22ex BP674520 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL086k04 BJ066594 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088m23 BJ066970 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL409n20ex BP710283 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
80F6A BG354660 5' X. laevis.S Harland stage 19-23 Xenopus laevis cDNA whole organism NF stage 19 to NF stage 23
XL429p09ex BP678477 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429p09ex BP715490 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL086k04 BJ083929 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088m23 BJ084311 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25