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Summary Expression Phenotypes Gene Literature (3) GO Terms (1) Nucleotides (289) Proteins (125) Interactants (391) Wiki
XB-GENEPAGE-854113

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pdlim5 - All

Models - Gene (40)
Models - mRNA (60)
mRNAs (45)
ESTs (63)

Models - Gene (40)

Source Version Model Species
NCBI 10.0 XBXT10g002080 X. tropicalis
NCBI 10.1 XBXL10_1g1229 X. laevis.L
NCBI 10.1 XBXL10_1g4124 X. laevis.S
ENSEMBL 10.0 pdlim5 X. tropicalis
JGI 9.1 Xelaev18005761m.g X. laevis.L
JGI 9.1 Xelaev18009452m.g X. laevis.S
Xenbase 9.1 gene18105 X. tropicalis
Xenbase 9.2 gene5794 X. laevis.L
Xenbase 9.2 gene1553 X. laevis.S
ENSEMBL 9.1 pdlim5 X. tropicalis
JGI 7.1 Xetro.A02704 X. tropicalis
JGI 7.2 Xelaev16070802m.g X. laevis.L
JGI 6.0 XeXenL6RMv10018698m.g X. laevis.L
JGI 6.0 XeXenL6RMv10051182m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000019217 X. tropicalis
JGI 4.1 C_scaffold_234000002 X. tropicalis
JGI 4.1 e_gw1.234.19.1 X. tropicalis
JGI 4.1 e_gw1.234.2.1 X. tropicalis
JGI 4.1 e_gw1.234.3.1 X. tropicalis
JGI 4.1 e_gw1.234.38.1 X. tropicalis
JGI 4.1 e_gw1.234.40.1 X. tropicalis
JGI 4.1 e_gw1.234.54.1 X. tropicalis
JGI 4.1 e_gw1.234.58.1 X. tropicalis
JGI 4.1 gw1.234.19.1 X. tropicalis
JGI 4.1 gw1.234.2.1 X. tropicalis
JGI 4.1 gw1.234.3.1 X. tropicalis
JGI 4.1 gw1.234.38.1 X. tropicalis
JGI 4.1 gw1.234.40.1 X. tropicalis
JGI 4.1 gw1.234.54.1 X. tropicalis
JGI 4.1 gw1.234.58.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2340003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2340007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_234000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_234000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_234000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_234000002 X. tropicalis

Models - mRNA (60)

Source Version Model Species
NCBI 10.0 mRNA010483 X. tropicalis
NCBI 10.1 XBmRNA1984 X. laevis.L
NCBI 10.1 XBmRNA7585 X. laevis.S
ENSEMBL 10.0 ENSXETT00000100441 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089785 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090465 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071930 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093391 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089141 X. tropicalis
ENSEMBL 10.0 ENSXETT00000041640 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070457 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066791 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098141 X. tropicalis
JGI 9.1 Xelaev18005761m X. laevis.L
JGI 9.1 Xelaev18009452m X. laevis.S
Xenbase 9.1 rna38652 X. tropicalis
Xenbase 9.2 rna16959 X. laevis.L
Xenbase 9.2 rna4512 X. laevis.S
ENSEMBL 9.1 ENSXETT00000066791 X. tropicalis
ENSEMBL 9.1 ENSXETT00000041640 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093391 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090465 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089141 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100441 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089785 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071930 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070457 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098141 X. tropicalis
JGI 7.1 Xetro.A02704.1 X. tropicalis
JGI 7.2 Xelaev16070802m X. laevis.L
JGI 6.0 XeXenL6RMv10018698m X. laevis.L
JGI 6.0 XeXenL6RMv10051182m X. laevis.L
JGI 4.1 C_scaffold_234000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041636 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041643 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041640 X. tropicalis
JGI 4.1 e_gw1.234.19.1 X. tropicalis
JGI 4.1 e_gw1.234.2.1 X. tropicalis
JGI 4.1 e_gw1.234.3.1 X. tropicalis
JGI 4.1 e_gw1.234.38.1 X. tropicalis
JGI 4.1 e_gw1.234.40.1 X. tropicalis
JGI 4.1 e_gw1.234.54.1 X. tropicalis
JGI 4.1 e_gw1.234.58.1 X. tropicalis
JGI 4.1 gw1.234.19.1 X. tropicalis
JGI 4.1 gw1.234.2.1 X. tropicalis
JGI 4.1 gw1.234.3.1 X. tropicalis
JGI 4.1 gw1.234.38.1 X. tropicalis
JGI 4.1 gw1.234.40.1 X. tropicalis
JGI 4.1 gw1.234.54.1 X. tropicalis
JGI 4.1 gw1.234.58.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2340003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2340007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_234000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_234000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_234000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_234000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_234000002 X. tropicalis

mRNAs (45)

Clone Accession Species Library Anatomy Stage
TGas034h23 CR762227 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6978326 BC090094 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
Tgas038h14 EU755362 X. tropicalis
Tgas088n14 EU755361 X. tropicalis
NM_001015813 X. tropicalis
XM_012961700 X. tropicalis
XM_012961695 X. tropicalis
XM_012961692 X. tropicalis
XM_012961691 X. tropicalis
XM_012961690 X. tropicalis
XM_012961688 X. tropicalis
XM_012961683 X. tropicalis
XM_012961677 X. tropicalis
XM_012961674 X. tropicalis
XM_012961673 X. tropicalis
XM_018092971 X. tropicalis
XM_012961669 X. tropicalis
XM_012961664 X. tropicalis
XM_031899672 X. tropicalis
XM_031899670 X. tropicalis
IMAGE:6875360 BC081236 X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
NM_001094326 X. laevis.S
IMAGE:7975066 BC142560 X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
NM_001099881 X. laevis.L
XM_018237951 X. laevis.S
XM_018237944 X. laevis.S
XM_041575805 X. laevis.S
XM_041575803 X. laevis.S
XM_041575798 X. laevis.S
XM_041575793 X. laevis.S
XM_041579798 X. laevis.L
XM_041579733 X. laevis.L
XM_041579696 X. laevis.L
XM_041579662 X. laevis.L
XM_041579596 X. laevis.L
XM_041579572 X. laevis.L
XM_041579537 X. laevis.L
XM_041579498 X. laevis.L
XM_041579453 X. laevis.L
XM_041579413 X. laevis.L
XM_041579379 X. laevis.L
XM_041579355 X. laevis.L
XM_041579310 X. laevis.L
XM_041579026 X. laevis.L
XM_041578674 X. laevis.L

ESTs (63)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8890609 EL850341 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8940672 EL645202 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8938651 EL641736 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8941507 EL632303 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8934234 EL635776 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7594964 CX332360 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7579074 CX417931 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578798 CX417032 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550315 CX485952 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7847993 DT532163 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7846554 DT530398 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7855176 DT397830 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7853492 DT394987 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7853755 DT394470 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7852095 DT391803 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7851615 DT391093 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7850832 DT389908 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7534796 CX429649 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7647575 CX805902 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7525091 CX439622 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas143o09 AL968691 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas115a11 AL966797 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas088n14 AL960296 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas038h14 AL651823 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas034h23 AL649247 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021f02 AL633113 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas005c11 AL594222 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu117k10 AL799723 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056e05 AL677131 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas055h15 AL676354 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu053d18 AL674581 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6978326 CF148913 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas097e20 AL970957 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8890609 EL850342 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8940672 EL645201 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8941507 EL632302 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8934234 EL635775 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7847993 DT532162 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7846554 DT530397 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7855176 DT397829 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7853492 DT394986 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7852095 DT391802 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7851615 DT391092 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7850832 DT389907 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7550315 CX485951 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534796 CX429648 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579074 CX417930 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578798 CX417031 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7594964 CX332359 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas097e20 BX754735 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055h15 BX747090 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu117k10 BX701774 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056e05 BX688856 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053d18 BX684373 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl310l03 DC126240 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk104f07ex DC037013 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7975066 DR725528 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL080d08 BJ064621 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL056i21 BJ070434 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk104f07ex DC004133 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7975066 DR725482 3' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL056i21 BJ087466 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL080d08 BJ076284 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25