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Summary Expression Gene Literature (22) GO Terms (5) Nucleotides (154) Proteins (41) Interactants (153) Wiki
XB-GENEPAGE-876556

All tropicalis laevis

Nucleotide sequences for nif - All

Models - Gene (31)
Models - mRNA (31)
Unigene Clusters (4)
Gurdon EST Clusters (3)
mRNAs (8)
ESTs (61)

Models - Gene (31)

Source Version Model Species
Xenbase 9.2 gene19615 laevis.L
Xenbase 9.2 gene415 laevis.S
Xenbase 9.1 gene634 tropicalis
JGI 9.1 Xelaev18018530m.g laevis.L
JGI 9.1 Xelaev18020362m.g laevis.S
JGI 8.0 Xetrov14012838m.g tropicalis
JGI 7.2 Xelaev16033021m.g laevis.L
JGI 7.2 Xelaev16014095m.g laevis.S
JGI 7.1 Xetro.C00501 tropicalis
JGI 6.0 XeXenL6RMv10003101m.g laevis.L
JGI 6.0 XeXenL6RMv10019838m.g laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_143000012 tropicalis
ENSEMBL 4.1 ENSXETG00000008516 tropicalis
JGI 4.1 gw1.143.114.1 tropicalis
JGI 4.1 gw1.143.115.1 tropicalis
JGI 4.1 gw1.143.117.1 tropicalis
JGI 4.1 e_gw1.143.114.1 tropicalis
JGI 4.1 e_gw1.143.115.1 tropicalis
JGI 4.1 e_gw1.143.117.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1430008 tropicalis
JGI 4.1 estExt_Genewise1.C_1430114 tropicalis
JGI 4.1 estExt_Genewise1.C_1430115 tropicalis
JGI 4.1 estExt_Genewise1.C_1430117 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1430003 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1430012 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1430013 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1430005 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_143000004 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_143000003 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_143000013 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_143000005 tropicalis

Models - mRNA (31)

Source Version Model Species
Xenbase 9.2 rna57318 laevis.L
Xenbase 9.2 rna1200 laevis.S
JGI 9.1 Xelaev18018530m laevis.L
JGI 9.1 Xelaev18020362m laevis.S
Xenbase 9.1 rna1991 tropicalis
JGI 8.0 Xetrov14012838m tropicalis
JGI 7.2 Xelaev16014095m laevis.S
JGI 7.2 Xelaev16033021m laevis.L
JGI 7.1 Xetro.C00501.1 tropicalis
JGI 6.0 XeXenL6RMv10003101m laevis.L
JGI 6.0 XeXenL6RMv10019838m laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_143000012 tropicalis
ENSEMBL 4.1 ENSXETT00000018642 tropicalis
JGI 4.1 e_gw1.143.114.1 tropicalis
JGI 4.1 e_gw1.143.115.1 tropicalis
JGI 4.1 e_gw1.143.117.1 tropicalis
JGI 4.1 gw1.143.114.1 tropicalis
JGI 4.1 gw1.143.115.1 tropicalis
JGI 4.1 gw1.143.117.1 tropicalis
JGI 4.1 estExt_FilteredModels1.C_1430008 tropicalis
JGI 4.1 estExt_Genewise1.C_1430114 tropicalis
JGI 4.1 estExt_Genewise1.C_1430115 tropicalis
JGI 4.1 estExt_Genewise1.C_1430117 tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1430003 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1430012 tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1430013 tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1430005 tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_143000004 tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_143000003 tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_143000013 tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_143000005 tropicalis

Gurdon EST Clusters (3)

ID Species
1012076683 tropicalis
1012800261 laevis.L
1012781469 laevis.S

mRNAs (8)

Clone Accession Species Library Anatomy Stage
TNeu001i06 CR760353 tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5308388 BC074515 tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_001006106 tropicalis
IMAGE:4960308 BC077476 laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5536993 BC043782 laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001093335 laevis.S
NM_001086012 laevis.L
M86653 laevis.L

ESTs (61)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8956190 EL655164 5' tropicalis NICHD_XGC_tropInt_62 intestine frog
xtbs12K09 CN076605 5' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7634588 CX338394 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7549591 CX484597 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546931 CX500036 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7595528 CX335843 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7559878 CX515582 5' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7658897 CX838179 5' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7791227 DR905767 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615789 DR896716 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7674747 CX884783 5' tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7673647 CX882808 5' tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7672303 CX880776 5' tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7662529 CX844456 5' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7656770 CX828097 5' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650581 CX811212 5' tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7626331 CX379511 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7588011 CX314061 5' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA037j23 CR575875 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA037k01 CR574789 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA003d10 CR560300 5' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA041g23 CR434012 5' tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas098i23 AL964850 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032d15 AL648489 5' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA030o16 BX743575 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034f22 BX740098 5' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu001i06 AL634348 5' tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6978664 CF150046 5' tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5308388 BQ390805 5' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xtbs12K09 CN076604 3' tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7546931 CX500035 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7674747 CX884782 3' tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7672303 CX880775 3' tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7662529 CX844455 3' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658897 CX838178 3' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7656770 CX828096 3' tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7791227 DR905766 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634588 DR902006 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7650581 CX811211 3' tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7673647 CX882807 3' tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7559878 CX515581 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549591 CX484596 3' tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7626331 CX379510 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595528 CX335842 3' tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA037j23 CR575876 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA037k01 CR574790 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA026j05 CR573701 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA003d10 CR560301 3' tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr18F17 CN100955 3' tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas098i23 BX756235 3' tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA030o16 BX743576 3' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034f22 BX740099 3' tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5308388 BQ390804 3' tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGp998J0212227 BX850504 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL094p16 BJ071624 5' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054g08 BJ069727 5' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5536993 BQ731285 5' laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4960308 BM192271 5' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL094p16 BJ091377 3' laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054g08 BJ086824 3' laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4960308 BM192203 3' laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
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