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Summary Expression Phenotypes Gene Literature (17) GO Terms (69) Nucleotides (260) Proteins (61) Interactants (332) Wiki
XB-GENEPAGE-877229

Show:     All X. tropicalis X. laevis

Nucleotide sequences for chd7 - All

RefSeq mRNAs(7)
Models - Gene (29)
Models - mRNA (42)
mRNAs (11)
ESTs (129)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_002936112 XM_002936112.5 chromodomain-helicase-DNA-binding protein 7 isoform X1 10727 bp XP_002936158 X. tropicalis
XM_004915184 XM_004915184.4 chromodomain-helicase-DNA-binding protein 7 isoform X2 10724 bp XP_004915241 X. tropicalis
NM_001091800 NM_001091800.1 chromodomain helicase DNA binding protein 7 L homeolog 6112 bp NP_001085269 X. laevis.L
XM_018223750 XM_018223750.2 chromodomain-helicase-DNA-binding protein 7 isoform X1 10804 bp XP_018079239 X. laevis.S
XM_018223752 XM_018223752.2 chromodomain-helicase-DNA-binding protein 7 isoform X1 10456 bp XP_018079241 X. laevis.S
XM_018223753 XM_018223753.2 chromodomain-helicase-DNA-binding protein 7 isoform X1 10474 bp XP_018079242 X. laevis.S
XM_018223754 XM_018223754.2 chromodomain-helicase-DNA-binding protein 7 isoform X2 10802 bp XP_018079243 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g27974 X. laevis.L
NCBI 10.1 XBXL10_1g29569 X. laevis.S
NCBI 10.0 XBXT10g005143 X. tropicalis
ENSEMBL 10.0 chd7 X. tropicalis
Xenbase 9.2 gene13221 X. laevis.S
Xenbase 9.2 gene45283 X. laevis.L
JGI 9.1 Xelaev18032051m.g X. laevis.L
JGI 9.1 Xelaev18033747m.g X. laevis.S
Xenbase 9.1 gene32235 X. tropicalis
ENSEMBL 9.1 chd8 X. tropicalis
JGI 8.0 Xetrov14025723m.g X. tropicalis
JGI 7.2 Xelaev16063578m.g X. laevis.L
JGI 7.1 Xetro.F00439 X. tropicalis
JGI 6.0 XeXenL6RMv10047566m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000020180 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_189000007 X. tropicalis
JGI 4.1 e_gw1.189.18.1 X. tropicalis
JGI 4.1 e_gw1.189.52.1 X. tropicalis
JGI 4.1 e_gw1.189.81.1 X. tropicalis
JGI 4.1 gw1.189.52.1 X. tropicalis
JGI 4.1 gw1.189.81.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1890009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1890018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1890049 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1890077 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1890018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1890007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_189000018 X. tropicalis
JGI 4.1 gw1.189.18.1 X. tropicalis

mRNAs based on gene models(42)

Source Version Model Species
NCBI 10.1 XBmRNA55639 X. laevis.S
NCBI 10.1 XBmRNA52520 X. laevis.L
ENSEMBL 10.0 ENSXETT00000043540 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084424 X. tropicalis
NCBI 10.0 mRNA025494 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094266 X. tropicalis
Xenbase 9.2 rna89590 X. laevis.L
Xenbase 9.2 rna38478 X. laevis.S
Xenbase 9.1 rna61061 X. tropicalis
JGI 9.1 Xelaev18033747m X. laevis.S
JGI 9.1 Xelaev18032051m X. laevis.L
ENSEMBL 9.1 ENSXETT00000094266 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091349 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084424 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084093 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079619 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071755 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069773 X. tropicalis
ENSEMBL 9.1 ENSXETT00000043540 X. tropicalis
JGI 8.0 Xetrov14025723m X. tropicalis
JGI 7.2 Xelaev16063578m X. laevis.L
JGI 7.1 Xetro.F00439.1 X. tropicalis
JGI 7.1 Xetro.F00439.2 X. tropicalis
JGI 6.0 XeXenL6RMv10047566m X. laevis.L
JGI 4.1 gw1.189.18.1 X. tropicalis
JGI 4.1 gw1.189.52.1 X. tropicalis
JGI 4.1 gw1.189.81.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_189000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_189000018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1890077 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1890049 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1890018 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1890009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1890007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1890018 X. tropicalis
JGI 4.1 e_gw1.189.81.1 X. tropicalis
JGI 4.1 e_gw1.189.18.1 X. tropicalis
JGI 4.1 e_gw1.189.52.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043537 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043536 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043535 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043534 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
TEgg049h17 CR855520 X. tropicalis
XM_002936112 X. tropicalis
XM_004915184 X. tropicalis
IMAGE:6632611 BC072334 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4724622 BC126000 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6633007 BC128691 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091800 X. laevis.L
XM_018223750 X. laevis.S
XM_018223752 X. laevis.S
XM_018223753 X. laevis.S
XM_018223754 X. laevis.S

ESTs (129)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TGas126n18 AL972341 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st36j16 DC173753 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st4c24 DC174194 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st8i18 DC175464 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st37j16 DC176027 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st52i05 DC179611 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st53i05 DC179848 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st85j06 DC187864 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st94n11 DC190075 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st103g05 DC191354 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA034h02 CR588575 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA012l16 CR563466 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA054b10 CR437071 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA023a13 CR436669 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7686813 CX908305 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu018b17 AL635809 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu015p10 AL636093 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022m09 AL638614 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027c16 AL641251 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu024b03 AL642087 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070h16 AL776425 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065n06 AL784434 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078e09 AL784888 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103e11 AL786506 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu141b17 AL788946 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu136e12 AL789605 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu114n18 AL794461 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6994448 CF237470 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7742980 DN035562 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7513396 CX742914 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:4440110 BG512473 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7660978 CX841853 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646369 CX803805 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:5380984 BQ525891 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TGas024m23 AL627514 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas008c01 AL629996 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043b19 AL651495 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas100j12 AL971268 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st14h01 DC166923 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas144b23 AL972797 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7524112 CX438832 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524427 CX439021 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7614200 CX389929 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7646369 CX803804 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7548348 CX490601 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5380984 BQ525890 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7631875 CX397235 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst103g05 DC161378 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA034h02 CR588576 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
rst8i18 DC145145 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst37j16 DC145727 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst52e15 DC149261 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu078e09 BX687837 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103e11 BX693266 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu114n18 BX698489 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089f12 BX698762 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst52i05 DC149319 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas126n18 BX758208 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144b23 BX760579 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4440110 BG487204 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
rst85j06 DC157724 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst14h01 DC136854 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst15h01 DC137153 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst36j16 DC143506 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst4c24 DC143879 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7686813 CX908304 3' X. tropicalis NIH_XGC_tropTe4 testis frog
rst94n11 DC160068 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7564987 CX475504 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xl297k16 DC122354 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8537453 EB472110 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
PBX0059C08 AW637506 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0088B10 AW639935 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:7298034 CO388952 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6632611 BU907436 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6633007 BU907743 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3473583 BG578786 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
XL164p21 BJ613736 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189p20 BJ619650 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190p20 BJ619883 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL205l17 BJ623717 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL208h10 BJ624426 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL217p21 BJ627418 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl230g01 DC102781 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl253j06 DC109843 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl272i11 DC115455 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3436746 BF613354 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
xl300j10 DC123230 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl300j24 DC123243 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl301j24 DC123555 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl306i24 DC125044 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl312e13 DC126717 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL414f16ex BP673632 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL430m14ex BP679078 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL436k14ex BP681064 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL438a10ex BP681525 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439h10ex BP682014 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL403i23ex BP682385 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL463c11ex BP690970 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL409e11ex BP710115 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5