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Summary Expression Phenotypes Gene Literature (37) GO Terms (4) Nucleotides (172) Proteins (51) Interactants (954) Wiki
XB-GENEPAGE-939803

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for otx1 - All

Models - Gene (25)
Models - mRNA (25)
mRNAs (18)
ESTs (68)

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g013923 X. tropicalis
NCBI 10.1 XBXL10_1g22889 X. laevis.L
NCBI 10.1 XBXL10_1g24798 X. laevis.S
JGI 9.1 Xelaev18026512m.g X. laevis.L
JGI 9.1 Xelaev18028484m.g X. laevis.S
Xenbase 9.1 gene32562 X. tropicalis
Xenbase 9.2 gene12873 X. laevis.L
Xenbase 9.2 gene16029 X. laevis.S
JGI 8.0 Xetrov14023946m.g X. tropicalis
JGI 7.1 Xetro.E01314 X. tropicalis
JGI 7.2 Xelaev16005310m.g X. laevis.L
JGI 6.0 XeXenL6RMv10012758m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_473000019 X. tropicalis
JGI 4.1 e_gw1.473.41.1 X. tropicalis
JGI 4.1 e_gw1.473.42.1 X. tropicalis
JGI 4.1 e_gw1.473.43.1 X. tropicalis
JGI 4.1 gw1.473.41.1 X. tropicalis
JGI 4.1 gw1.473.42.1 X. tropicalis
JGI 4.1 gw1.473.43.1 X. tropicalis
JGI 4.1 TN8_1_query X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4730014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4730042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4730043 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4730019 X. tropicalis

Models - mRNA (25)

Source Version Model Species
NCBI 10.0 mRNA068870 X. tropicalis
NCBI 10.1 XBmRNA42643 X. laevis.L
NCBI 10.1 XBmRNA46287 X. laevis.S
JGI 9.1 Xelaev18026512m X. laevis.L
JGI 9.1 Xelaev18028484m X. laevis.S
Xenbase 9.1 rna61600 X. tropicalis
Xenbase 9.2 rna37416 X. laevis.L
Xenbase 9.2 rna46851 X. laevis.S
JGI 8.0 Xetrov14023946m X. tropicalis
JGI 7.1 Xetro.E01314.1 X. tropicalis
JGI 7.2 Xelaev16005310m X. laevis.L
JGI 6.0 XeXenL6RMv10012758m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_473000019 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028537 X. tropicalis
JGI 4.1 e_gw1.473.41.1 X. tropicalis
JGI 4.1 e_gw1.473.42.1 X. tropicalis
JGI 4.1 e_gw1.473.43.1 X. tropicalis
JGI 4.1 gw1.473.41.1 X. tropicalis
JGI 4.1 gw1.473.42.1 X. tropicalis
JGI 4.1 gw1.473.43.1 X. tropicalis
JGI 4.1 TN8_1_query X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4730014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4730042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4730043 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4730019 X. tropicalis

mRNAs (18)

Clone Accession Species Library Anatomy Stage
NM_203885 X. tropicalis
otx1-HAR448 BC063197 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
otx1-HAR448 BC063197 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379560 BC063197 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379560 BC063197 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_031901606 X. tropicalis
XM_031901605 X. tropicalis
XM_031901604 X. tropicalis
IMAGE:8319834 BC123255 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
AY029294 X. laevis.L
NM_001087540 X. laevis.L
XM_018264835 X. laevis.S
XM_018264834 X. laevis.S
XM_018264833 X. laevis.S
XM_018261693 X. laevis.L
XM_018261692 X. laevis.L
XM_018261691 X. laevis.L
XM_041564173 X. laevis.S

ESTs (68)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu023j09 AL641880 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7602196 CX365709 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7576533 CX431778 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555935 CX503534 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558589 CX497870 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562460 CX467003 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531655 CX421264 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533551 CX434614 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas129b18 AL961626 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106p24 AL968020 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr43L15 CN115973 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA051c20 CR579512 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu017d05 AL645119 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas059i22 AL674808 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu091o10 AL781315 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu139k16 AL789913 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas017j12 AL629573 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas016c04 AL631870 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049b20 AL653136 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027g13 AL655266 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079n08 AL774677 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
otx1-HAR448 BQ523666 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7531655 CX421263 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533551 CX434613 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562460 CX467002 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558589 CX497869 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555935 CX503533 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas079n08 BX750613 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106p24 BX754396 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095n08 BX763046 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr43L15 CN115972 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA051c20 CR579513 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7602196 CX365708 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu091o10 BX695983 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas059i22 BX748159 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
otx1-HAR448 BQ523665 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xlk147d20ex DC050849 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk7b10ex DC060988 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl298h24 DC122587 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl303p23 DC124237 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL442k03ex BP683324 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL443b17ex BP683480 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL453j01ex BP687214 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL464d09ex BP691327 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL468p17ex BP692582 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8319105 DY550898 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8319834 DY557317 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
p17e10 AU245520 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
XL145m13 BJ094533 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998I108490 BX846753 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
XL421j03ex BP676315 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL433k16ex BP680040 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL472a01ex BP696959 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3550222 BG578968 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3472867 BI676191 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:5154908 CA792100 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL037i04 BJ036813 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk7b10ex DC027505 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk141o14ex DC015834 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk147d20ex DC017521 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl303p23 DC089346 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL472a01ex BP727990 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL453j01ex BP722855 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL464d09ex BP725797 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL468p17ex BP726905 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3474129 BG160925 3' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:3517395 BG413969 3' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
XL036l11 BJ051762 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15