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Summary Expression Phenotypes Gene Literature (1) GO Terms (2) Nucleotides (227) Proteins (52) Interactants (92) Wiki
XB-GENEPAGE-941588

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for vat1 - All

Models - Gene (37)
Models - mRNA (37)
mRNAs (10)
ESTs (112)

Models - Gene (37)

Source Version Model Species
NCBI 10.0 XBXT10g017517 X. tropicalis
NCBI 10.1 XBXL10_1g39817 X. laevis.L
NCBI 10.1 XBXL10_1g42842 X. laevis.S
ENSEMBL 10.0 vat1 X. tropicalis
JGI 9.1 Xelaev18043844m.g X. laevis.L
JGI 9.1 Xelaev18046511m.g X. laevis.S
Xenbase 9.1 gene33416 X. tropicalis
Xenbase 9.2 gene15064 X. laevis.L
Xenbase 9.2 gene10794 X. laevis.S
ENSEMBL 9.1 vat1 X. tropicalis
JGI 8.0 Xetrov14040845m.g X. tropicalis
JGI 7.1 Xetro.J00670 X. tropicalis
JGI 7.2 Xelaev16046972m.g X. laevis.L
JGI 6.0 XeXenL6RMv10007955m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014900 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_29000029 X. tropicalis
JGI 4.1 e_gw1.29.199.1 X. tropicalis
JGI 4.1 e_gw1.29.231.1 X. tropicalis
JGI 4.1 e_gw1.29.277.1 X. tropicalis
JGI 4.1 e_gw1.29.358.1 X. tropicalis
JGI 4.1 e_gw1.29.363.1 X. tropicalis
JGI 4.1 e_gw1.29.37.1 X. tropicalis
JGI 4.1 e_gw1.29.429.1 X. tropicalis
JGI 4.1 e_gw1.29.58.1 X. tropicalis
JGI 4.1 e_gw1.29.66.1 X. tropicalis
JGI 4.1 gw1.29.199.1 X. tropicalis
JGI 4.1 gw1.29.231.1 X. tropicalis
JGI 4.1 gw1.29.277.1 X. tropicalis
JGI 4.1 gw1.29.358.1 X. tropicalis
JGI 4.1 gw1.29.363.1 X. tropicalis
JGI 4.1 gw1.29.37.1 X. tropicalis
JGI 4.1 gw1.29.429.1 X. tropicalis
JGI 4.1 gw1.29.58.1 X. tropicalis
JGI 4.1 gw1.29.66.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000124 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000125 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_29000034 X. tropicalis

Models - mRNA (37)

Source Version Model Species
NCBI 10.0 mRNA086508 X. tropicalis
NCBI 10.1 XBmRNA74920 X. laevis.L
NCBI 10.1 XBmRNA80539 X. laevis.S
ENSEMBL 10.0 ENSXETT00000063461 X. tropicalis
JGI 9.1 Xelaev18043844m X. laevis.L
JGI 9.1 Xelaev18046511m X. laevis.S
Xenbase 9.1 rna63014 X. tropicalis
Xenbase 9.2 rna43954 X. laevis.L
Xenbase 9.2 rna31370 X. laevis.S
ENSEMBL 9.1 ENSXETT00000063461 X. tropicalis
JGI 8.0 Xetrov14040845m X. tropicalis
JGI 7.1 Xetro.J00670.1 X. tropicalis
JGI 7.2 Xelaev16046972m X. laevis.L
JGI 6.0 XeXenL6RMv10007955m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_29000029 X. tropicalis
ENSEMBL 4.1 ENSXETT00000032583 X. tropicalis
JGI 4.1 e_gw1.29.199.1 X. tropicalis
JGI 4.1 e_gw1.29.231.1 X. tropicalis
JGI 4.1 e_gw1.29.277.1 X. tropicalis
JGI 4.1 e_gw1.29.358.1 X. tropicalis
JGI 4.1 e_gw1.29.363.1 X. tropicalis
JGI 4.1 e_gw1.29.37.1 X. tropicalis
JGI 4.1 e_gw1.29.429.1 X. tropicalis
JGI 4.1 e_gw1.29.58.1 X. tropicalis
JGI 4.1 e_gw1.29.66.1 X. tropicalis
JGI 4.1 gw1.29.199.1 X. tropicalis
JGI 4.1 gw1.29.231.1 X. tropicalis
JGI 4.1 gw1.29.277.1 X. tropicalis
JGI 4.1 gw1.29.358.1 X. tropicalis
JGI 4.1 gw1.29.363.1 X. tropicalis
JGI 4.1 gw1.29.37.1 X. tropicalis
JGI 4.1 gw1.29.429.1 X. tropicalis
JGI 4.1 gw1.29.58.1 X. tropicalis
JGI 4.1 gw1.29.66.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000124 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000125 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_29000034 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
TGas125b09 CT030099 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6977828 BC080442 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8940783 BC153702 X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
XM_002932511 X. tropicalis
IMAGE:6632190 BC128973 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:8330578 BC124986 X. laevis.S
IMAGE:5514842 BC073628 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001092503 X. laevis.L
IMAGE:5048481 BC160679 X. laevis.S
NM_001122695 X. laevis.S

ESTs (112)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8957961 EL662211 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8958922 EL658047 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8940783 EL631669 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st84i14 DC187610 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st59i24 DC181305 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st5j17 DC174595 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30h13 DC172104 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st28e24 DC171181 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st91o16 DC189389 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st85i14 DC187853 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO8501 CX956070 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7627947 CX381346 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7579014 CX417839 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576169 CX430931 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7600609 CX345492 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7539832 CX460916 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536723 CX478391 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565170 CX481736 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561113 CX463994 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560647 CX463431 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567835 CX508945 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7698145 CX929764 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7692667 CX918979 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7671608 CX879933 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7650355 CX811305 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642038 CX796523 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7519856 CX480086 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526742 CX444274 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas125b09 AL961927 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021k18 AL632976 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas010l02 AL630609 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas004l05 AL595959 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu081f07 AL804536 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu127b17 AL803737 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas003h11 AL595848 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas005j07 AL595499 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu114h07 AL799785 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137p14 AL786154 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137p13 AL785915 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas066d23 AL681549 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu049i02 AL662404 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu038k17 AL657683 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu034b07 AL656233 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu007e04 AL642578 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu003h17 AL640019 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6996085 CF238571 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6977828 CF225046 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6987269 CF221317 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988478 CF220287 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6985456 CF151792 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6978266 CF148926 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6978316 CF148918 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas140b16 AL962996 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383975 BQ396869 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5307928 BQ389692 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:4440604 BG512994 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:8940783 EL631668 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
rst84i14 DC157472 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst59i24 DC151040 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst5j17 DC144272 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst30h13 DC141796 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst28e24 DC141018 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO8501 CX956069 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7579014 CX417838 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560647 CX463430 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7698145 CX929763 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7692667 CX918978 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7671608 CX879932 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7650355 CX811304 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642038 CX796522 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7567835 CX508944 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565170 CX481735 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519856 CX480085 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561113 CX463993 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539832 CX460915 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576169 CX430930 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7627947 CX381345 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600609 CX345491 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas102l01 BX762748 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas125b09 BX757710 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066d23 BX745936 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu127b17 BX697586 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu081f07 BX696631 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu114h07 BX689890 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5383975 BQ396868 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5307928 BQ389691 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:4440604 BG486210 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xl315h23 DC127650 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk101a06ex DC035950 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk55p03ex DC034361 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk66g02ex DC056274 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL463k07ex BP691137 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL458h07ex BP688780 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL514k10ex BP705351 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL512a20ex BP704647 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL484g08ex BP698326 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7298772 CO385385 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL437e09ex BP681272 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL166e10 BJ614031 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5