Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (36) Nucleotides (736) Proteins (113) Interactants (39) Wiki
XB-GENEPAGE-942719

Show:     All X. tropicalis X. laevis

Nucleotide sequences for caprin1 - All

RefSeq mRNAs(14)
Models - Gene (32)
Models - mRNA (66)
mRNAs (19)
ESTs (448)

RefSeq mRNAs (14)

Accession Version Protein Name Length Protein Species
NM_001030368 NM_001030368.1 caprin-1 2291 bp NP_001025539 X. tropicalis
XM_012961208 XM_012961208.3 caprin-1 isoform X1 2903 bp XP_012816662 X. tropicalis
XM_012961209 XM_012961209.3 caprin-1 isoform X2 2934 bp XP_012816663 X. tropicalis
XM_012961210 XM_012961210.2 caprin-1 isoform X3 3105 bp XP_012816664 X. tropicalis
XM_031900122 XM_031900122.1 XP_031755982.1 caprin-1 isoform X4 2849 bp XP_031755982 X. tropicalis
NM_001086704 NM_001086704.1 cell cycle associated protein 1 S homeolog 2281 bp NP_001080173 X. laevis.S
XM_018259375 XM_018259375.2 cell cycle associated protein 1 S homeolog isoform X1 2977 bp XP_018114864 X. laevis.S
XM_018259376 XM_018259376.2 cell cycle associated protein 1 S homeolog isoform X1 2956 bp XP_018114865 X. laevis.S
XM_018259377 XM_018259377.2 cell cycle associated protein 1 S homeolog isoform X2 3009 bp XP_018114866 X. laevis.S
XM_018259378 XM_018259378.2 cell cycle associated protein 1 S homeolog isoform X3 2703 bp XP_018114867 X. laevis.S
XM_018259379 XM_018259379.2 cell cycle associated protein 1 S homeolog isoform X4 2913 bp XP_018114868 X. laevis.S
XM_018259380 XM_018259380.2 cell cycle associated protein 1 S homeolog isoform X5 2945 bp XP_018114869 X. laevis.S
XM_018259381 XM_018259381.2 cell cycle associated protein 1 S homeolog isoform X6 2877 bp XP_018114870 X. laevis.S
NM_001246303 NM_001246303.1 uncharacterized protein LOC100653491 2250 bp NP_001233232 X. laevis.L

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g17825 X. laevis.L
NCBI 10.1 XBXL10_1g20873 X. laevis.S
NCBI 10.0 XBXT10g002447 X. tropicalis
ENSEMBL 10.0 caprin1 X. tropicalis
Xenbase 9.2 gene7819 X. laevis.L
Xenbase 9.2 gene9547 X. laevis.S
JGI 9.1 Xelaev18021916m.g X. laevis.L
JGI 9.1 Xelaev18024438m.g X. laevis.S
Xenbase 9.1 gene2021 X. tropicalis
ENSEMBL 9.1 caprin1 X. tropicalis
JGI 8.0 Xetrov14016597m.g X. tropicalis
JGI 7.2 Xelaev16003718m.g X. laevis.S
JGI 7.1 Xetro.D00161 X. tropicalis
JGI 6.0 XeXenL6RMv10006206m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000003985 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_82000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_82000016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_82000015 X. tropicalis
JGI 4.1 e_gw1.82.333.1 X. tropicalis
JGI 4.1 e_gw1.82.334.1 X. tropicalis
JGI 4.1 e_gw1.82.336.1 X. tropicalis
JGI 4.1 gw1.82.333.1 X. tropicalis
JGI 4.1 gw1.82.334.1 X. tropicalis
JGI 4.1 gw1.82.336.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_820017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_820331 X. tropicalis
JGI 4.1 estExt_Genewise1.C_820332 X. tropicalis
JGI 4.1 estExt_Genewise1.C_820334 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_820006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_820015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_820016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_820008 X. tropicalis

mRNAs based on gene models(66)

Source Version Model Species
NCBI 10.1 XBmRNA32876 X. laevis.L
NCBI 10.1 XBmRNA38460 X. laevis.S
ENSEMBL 10.0 ENSXETT00000084462 X. tropicalis
NCBI 10.0 mRNA012402 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084665 X. tropicalis
ENSEMBL 10.0 ENSXETT00000008645 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087799 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090427 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067360 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075736 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080762 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073628 X. tropicalis
ENSEMBL 10.0 ENSXETT00000008643 X. tropicalis
Xenbase 9.2 rna22824 X. laevis.L
Xenbase 9.2 rna27779 X. laevis.S
ENSEMBL 9.1 ENSXETT00000090427 X. tropicalis
ENSEMBL 9.1 ENSXETT00000008643 X. tropicalis
ENSEMBL 9.1 ENSXETT00000008645 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067360 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073628 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075736 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080762 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084462 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084665 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087799 X. tropicalis
Xenbase 9.1 rna6631 X. tropicalis
JGI 9.1 Xelaev18024438m X. laevis.S
JGI 9.1 Xelaev18021916m X. laevis.L
JGI 8.0 Xetrov14016597m X. tropicalis
JGI 7.2 Xelaev16003718m X. laevis.S
JGI 7.1 Xetro.D00161.3 X. tropicalis
JGI 7.1 Xetro.D00161.4 X. tropicalis
JGI 7.1 Xetro.D00161.5 X. tropicalis
JGI 7.1 Xetro.D00161.6 X. tropicalis
JGI 7.1 Xetro.D00161.7 X. tropicalis
JGI 7.1 Xetro.D00161.8 X. tropicalis
JGI 7.1 Xetro.D00161.9 X. tropicalis
JGI 7.1 Xetro.D00161.1 X. tropicalis
JGI 7.1 Xetro.D00161.10 X. tropicalis
JGI 7.1 Xetro.D00161.11 X. tropicalis
JGI 7.1 Xetro.D00161.14 X. tropicalis
JGI 7.1 Xetro.D00161.2 X. tropicalis
JGI 7.1 Xetro.D00161.15 X. tropicalis
JGI 7.1 Xetro.D00161.12 X. tropicalis
JGI 7.1 Xetro.D00161.13 X. tropicalis
JGI 6.0 XeXenL6RMv10006206m X. laevis.S
JGI 4.1 estExt_fgenesh1_kg.C_820006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_820016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_820015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_820008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_820017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_820331 X. tropicalis
JGI 4.1 estExt_Genewise1.C_820332 X. tropicalis
JGI 4.1 estExt_Genewise1.C_820334 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_82000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_82000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_82000016 X. tropicalis
JGI 4.1 gw1.82.333.1 X. tropicalis
JGI 4.1 gw1.82.334.1 X. tropicalis
JGI 4.1 gw1.82.336.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000008645 X. tropicalis
JGI 4.1 e_gw1.82.336.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000008644 X. tropicalis
ENSEMBL 4.1 ENSXETT00000008643 X. tropicalis
JGI 4.1 e_gw1.82.334.1 X. tropicalis
JGI 4.1 e_gw1.82.333.1 X. tropicalis

mRNAs from cDNA libraries (19)

Clone Accession Species Library Anatomy Stage
IMAGE:5307729 BC090573 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TEgg052m03 CT030414 X. tropicalis
NM_001030368 X. tropicalis
XM_012961208 X. tropicalis
XM_012961209 X. tropicalis
XM_012961210 X. tropicalis
XM_031900122 X. tropicalis
AB128031 X. laevis.S
IMAGE:5541985 BC044999 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086704 X. laevis.S
XM_018259375 X. laevis.S
XM_018259376 X. laevis.S
XM_018259377 X. laevis.S
XM_018259378 X. laevis.S
XM_018259379 X. laevis.S
XM_018259380 X. laevis.S
XM_018259381 X. laevis.S
IMAGE:9041620 BC169985 X. laevis.L
NM_001246303 X. laevis.L

ESTs (448)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA035g17 CR429903 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA066p20 CR429515 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA009n06 CR417090 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6977021 CF224104 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5382721 BQ394355 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7518476 CX750374 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TNeu086d03 AL803053 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu101a20 AL801952 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu142l03 AL795635 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115d05 AL794898 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu111i04 AL792219 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103g11 AL786517 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078e11 AL784889 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu066g16 AL783677 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068g17 AL783593 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064f17 AL783498 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078n20 AL779933 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078b24 AL779869 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089l12 AL778999 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062e17 AL674172 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu036m04 AL661657 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043o21 AL660350 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu048c06 AL659587 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu033i08 AL656958 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu032n03 AL656712 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu031l09 AL656480 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu031m09 AL656321 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu031a01 AL656253 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu031p22 AL655720 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027p13 AL641140 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu019l12 AL637882 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu019l19 AL637629 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu008i17 AL635374 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8953109 EG654891 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7802464 DR836835 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7799826 DN061751 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7746867 DN042161 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7745747 DN040107 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7736245 DN022266 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7713450 CX971883 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710101 CX965386 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
CAAO10446 CX959677 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO4964 CX936519 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7794390 CX929428 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696152 CX925988 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694878 CX923638 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694545 CX922588 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694669 CX922444 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689757 CX913416 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689489 CX913198 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689353 CX912551 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689003 CX911741 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7017053 CF525052 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7796730 DR884782 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7637645 CX407608 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630798 CX396294 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615221 CX391411 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613843 CX389560 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598269 CX387607 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628968 CX383305 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607460 CX368147 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA059e10 BX744741 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9020110 EL869437 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st17g24 DC167820 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st18g24 DC168108 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st19j10 DC168433 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st24m14 DC170183 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st27d04 DC170856 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st28m05 DC171310 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29h14 DC171521 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st3g23 DC173985 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st7e15 DC175094 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st8m13 DC175534 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st52e03 DC179547 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st61p15 DC181886 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st71n17 DC184401 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st83p19 DC187468 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st84p19 DC187721 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st100e08 DC190655 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st102d17 DC191085 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st103d17 DC191316 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTpA028e06 BX743106 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA055b11 BX740909 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5307729 BQ389249 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8870682 EL712442 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:5307854 BQ389474 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989568 CF218484 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989568 CF218485 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988642 CF220155 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8867412 EL706720 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7512704 CX741517 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8871315 EL713569 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7512710 CX741560 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8903438 EL794185 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7513253 CX742624 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7515392 CX745919 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8866165 EL703616 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7515398 CX745961 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TTpA055o19 BX740899 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40