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Summary Expression Phenotypes Gene Literature (0) GO Terms (19) Nucleotides (93) Proteins (46) Interactants (4) Wiki
XB-GENEPAGE-945036

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smyd4 - All

RefSeq mRNAs(5)
Models - Gene (24)
Models - mRNA (28)
mRNAs (7)
ESTs (18)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001078820 NM_001078820.1 SET and MYND domain-containing protein 4 2748 bp NP_001072288 X. tropicalis
XM_012957236 XM_012957236.3 SET and MYND domain-containing protein 4 isoform X1 2665 bp XP_012812690 X. tropicalis
XM_012957238 XM_012957238.3 SET and MYND domain-containing protein 4 isoform X2 2745 bp XP_012812692 X. tropicalis
XM_012957240 XM_012957240.3 SET and MYND domain-containing protein 4 isoform X3 2481 bp XP_012812694 X. tropicalis
XM_018246147 XM_018246147.2 SET and MYND domain-containing protein 4 4564 bp XP_018101636 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g6538 X. laevis.L
NCBI 10.0 XBXT10g009215 X. tropicalis
ENSEMBL 10.0 smyd4 X. tropicalis
Xenbase 9.2 gene19819 X. laevis.L
JGI 9.1 Xelaev18011730m.g X. laevis.L
Xenbase 9.1 gene2459 X. tropicalis
ENSEMBL 9.1 smyd4 X. tropicalis
JGI 7.1 Xetro.B00396 X. tropicalis
JGI 6.0 XeXenL6RMv10046890m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013541 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2670066 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_267000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2670009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_267000009 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2670003 X. tropicalis
JGI 4.1 e_gw1.267.2.1 X. tropicalis
JGI 4.1 e_gw1.267.31.1 X. tropicalis
JGI 4.1 e_gw1.267.66.1 X. tropicalis
JGI 4.1 gw1.267.2.1 X. tropicalis
JGI 4.1 gw1.267.31.1 X. tropicalis
JGI 4.1 gw1.267.66.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2670007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2670002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2670031 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA12246 X. laevis.L
ENSEMBL 10.0 ENSXETT00000122780 X. tropicalis
ENSEMBL 10.0 ENSXETT00000029666 X. tropicalis
NCBI 10.0 mRNA045575 X. tropicalis
Xenbase 9.2 rna57880 X. laevis.L
ENSEMBL 9.1 ENSXETT00000029666 X. tropicalis
Xenbase 9.1 rna8174 X. tropicalis
JGI 9.1 Xelaev18011730m X. laevis.L
JGI 7.1 Xetro.B00396.2 X. tropicalis
JGI 7.1 Xetro.B00396.1 X. tropicalis
JGI 7.1 Xetro.B00396.3 X. tropicalis
JGI 6.0 XeXenL6RMv10046890m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_267000009 X. tropicalis
JGI 4.1 gw1.267.2.1 X. tropicalis
JGI 4.1 gw1.267.31.1 X. tropicalis
JGI 4.1 gw1.267.66.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_267000003 X. tropicalis
JGI 4.1 e_gw1.267.31.1 X. tropicalis
JGI 4.1 e_gw1.267.66.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029666 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029668 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2670003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2670009 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2670007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2670002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2670031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2670066 X. tropicalis
JGI 4.1 e_gw1.267.2.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7693371 BC121314 X. tropicalis NIH_XGC_tropTe4 testis frog
TGas125k11 CT025386 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001078820 X. tropicalis
XM_012957236 X. tropicalis
XM_012957238 X. tropicalis
XM_012957240 X. tropicalis
XM_018246147 X. laevis.L

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7693371 CX920279 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8918420 EL832183 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas125k11 AL961781 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6981722 CF225362 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
CAAO2781 CX933247 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7691406 CX917093 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas125k11 BX759030 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7693371 CX920278 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691406 CX917092 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6990938 CF216970 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl239l10 DC105629 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3744174 BF427042 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGp998M079020 BX843656 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
xl238l10 DC105316 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl238o22 DC105386 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL098f24 BJ072358 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098f24 BJ089382 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3744174 BG016607 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage