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Summary Expression Phenotypes Gene Literature (0) GO Terms (8) Nucleotides (148) Proteins (58) Interactants (50) Wiki
XB-GENEPAGE-947039

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hpcal1 - All

RefSeq mRNAs(8)
Models - Gene (32)
Models - mRNA (37)
mRNAs (11)
ESTs (39)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
NM_001044428 NM_001044428.1 hippocalcin-like protein 1 1468 bp NP_001037893 X. tropicalis
XM_031901744 XM_031901744.1 XP_031757604.1 hippocalcin-like protein 1 isoform X1 2142 bp XP_031757604 X. tropicalis
XM_031901745 XM_031901745.1 XP_031757605.1 hippocalcin-like protein 1 isoform X1 2082 bp XP_031757605 X. tropicalis
XM_031901746 XM_031901746.1 XP_031757606.1 hippocalcin-like protein 1 isoform X1 2069 bp XP_031757606 X. tropicalis
NM_001093598 NM_001093598.1 hippocalcin-like protein 1 1666 bp NP_001087067 X. laevis.L
XM_018261978 XM_018261978.2 hippocalcin-like protein 1 isoform X1 2052 bp XP_018117467 X. laevis.L
XM_018265939 XM_018265939.2 hippocalcin-like protein 1 2157 bp XP_018121428 X. laevis.S
XM_041565056 XM_041565056.1 XP_041420990.1 hippocalcin-like protein 1 2082 bp XP_041420990 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g26174 X. laevis.S
NCBI 10.1 XBXL10_1g24387 X. laevis.L
NCBI 10.0 XBXT10g017027 X. tropicalis
ENSEMBL 10.0 hpcal1 X. tropicalis
Xenbase 9.2 gene14410 X. laevis.S
Xenbase 9.2 gene345 X. laevis.L
JGI 9.1 Xelaev18030080m.g X. laevis.S
JGI 9.1 Xelaev18028042m.g X. laevis.L
Xenbase 9.1 gene24410 X. tropicalis
ENSEMBL 9.1 hpcal1 X. tropicalis
JGI 8.0 Xetrov14021195m.g X. tropicalis
JGI 7.2 Xelaev16012794m.g X. laevis.L
JGI 7.1 Xetro.E00371 X. tropicalis
JGI 6.0 XeXenL6RMv10012623m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003521 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_565000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_565000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000011 X. tropicalis
JGI 4.1 e_gw1.565.12.1 X. tropicalis
JGI 4.1 e_gw1.565.13.1 X. tropicalis
JGI 4.1 e_gw1.565.26.1 X. tropicalis
JGI 4.1 e_gw1.565.63.1 X. tropicalis
JGI 4.1 e_gw1.565.68.1 X. tropicalis
JGI 4.1 e_gw1.565.69.1 X. tropicalis
JGI 4.1 gw1.565.13.1 X. tropicalis
JGI 4.1 gw1.565.26.1 X. tropicalis
JGI 4.1 gw1.565.63.1 X. tropicalis
JGI 4.1 gw1.565.68.1 X. tropicalis
JGI 4.1 gw1.565.69.1 X. tropicalis
JGI 4.1 gw1.565.12.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_565000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000010 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA45656 X. laevis.L
NCBI 10.1 XBmRNA48967 X. laevis.S
ENSEMBL 10.0 ENSXETT00000117373 X. tropicalis
ENSEMBL 10.0 ENSXETT00000007606 X. tropicalis
NCBI 10.0 mRNA084390 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070479 X. tropicalis
Xenbase 9.2 rna1003 X. laevis.L
Xenbase 9.2 rna41955 X. laevis.S
ENSEMBL 9.1 ENSXETT00000093279 X. tropicalis
ENSEMBL 9.1 ENSXETT00000007606 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070479 X. tropicalis
Xenbase 9.1 rna48607 X. tropicalis
JGI 9.1 Xelaev18028042m X. laevis.L
JGI 9.1 Xelaev18030080m X. laevis.S
ENSEMBL 9.1 ENSXETT00000073411 X. tropicalis
JGI 8.0 Xetrov14021195m X. tropicalis
JGI 7.2 Xelaev16012794m X. laevis.L
JGI 7.1 Xetro.E00371.1 X. tropicalis
JGI 6.0 XeXenL6RMv10012623m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_565000003 X. tropicalis
JGI 4.1 e_gw1.565.13.1 X. tropicalis
JGI 4.1 e_gw1.565.26.1 X. tropicalis
JGI 4.1 e_gw1.565.63.1 X. tropicalis
JGI 4.1 e_gw1.565.68.1 X. tropicalis
JGI 4.1 e_gw1.565.69.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007606 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_565000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_565000007 X. tropicalis
JGI 4.1 e_gw1.565.12.1 X. tropicalis
JGI 4.1 gw1.565.12.1 X. tropicalis
JGI 4.1 gw1.565.13.1 X. tropicalis
JGI 4.1 gw1.565.26.1 X. tropicalis
JGI 4.1 gw1.565.63.1 X. tropicalis
JGI 4.1 gw1.565.68.1 X. tropicalis
JGI 4.1 gw1.565.69.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7657681 BC123918 X. tropicalis NIH_XGC_tropBrn3 brain frog
TNeu142p12 CR760317 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001044428 X. tropicalis
XM_031901744 X. tropicalis
XM_031901745 X. tropicalis
XM_031901746 X. tropicalis
IMAGE:6631425 BC077976 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001093598 X. laevis.L
XM_018261978 X. laevis.L
XM_018265939 X. laevis.S
XM_041565056 X. laevis.S

ESTs (39)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7631102 CX396403 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600189 CX344976 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586589 CX312408 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA019b01 BX710831 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8922105 EL836447 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8927992 EL675829 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7671595 CX879509 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670204 CX877160 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7661526 CX843402 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657681 CX829867 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8867702 EL706745 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8869306 EL709663 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7576644 CX422198 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu142p12 AL803892 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8866401 EL704258 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867702 EL706744 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:4439958 BG348797 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7576644 CX422197 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7631102 CX396402 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600189 DR892380 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7657681 CX829866 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661526 CX843401 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7670204 CX877159 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7671595 CX879508 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8927992 EL675828 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8922105 EL836448 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
XL103j14 BJ057881 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4783142 BM260978 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5440127 CF288109 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:7981249 DR723620 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:6872684 CB197781 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6631425 BU906431 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998F1210552 BX843639 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4677899 BI314913 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4677899 BI443217 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:7981249 DR723578 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4783142 BM260900 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL103j14 BJ075769 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5440127 CF288110 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32