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Summary Expression Phenotypes Gene Literature (1) GO Terms (23) Nucleotides (269) Proteins (82) Interactants (272) Wiki
XB-GENEPAGE-949376

Show:     All X. tropicalis X. laevis

Nucleotide sequences for brd1 - All

RefSeq mRNAs(22)
Models - Gene (23)
Models - mRNA (33)
mRNAs (29)
ESTs (91)

RefSeq mRNAs (22)

Accession Version Protein Name Length Protein Species
NM_001079563 NM_001079563.1 bromodomain-containing protein 1 3728 bp NP_001073031 X. tropicalis
XM_012959167 XM_012959167.3 bromodomain-containing protein 1 isoform X2 5104 bp XP_012814621 X. tropicalis
XM_012959168 XM_012959168.3 bromodomain-containing protein 1 isoform X3 4999 bp XP_012814622 X. tropicalis
XM_031897998 XM_031897998.1 XP_031753858.1 bromodomain-containing protein 1 isoform X1 5218 bp XP_031753858 X. tropicalis
NM_001092377 NM_001092377.1 bromodomain containing 1 L homeolog 4495 bp NP_001085846 X. laevis.L
XM_018250949 XM_018250949.2 bromodomain containing 1 L homeolog isoform X1 5597 bp XP_018106438 X. laevis.L
XM_018250950 XM_018250950.2 bromodomain containing 1 L homeolog isoform X2 5540 bp XP_018106439 X. laevis.L
XM_018250951 XM_018250951.2 bromodomain containing 1 L homeolog isoform X2 5032 bp XP_018106440 X. laevis.L
XM_018250955 XM_018250955.2 bromodomain containing 1 L homeolog isoform X4 5433 bp XP_018106444 X. laevis.L
XM_041585086 XM_041585086.1 XP_041441020.1 bromodomain containing 1 L homeolog isoform X3 5166 bp XP_041441020 X. laevis.L
XM_018255802 XM_018255802.2 bromodomain-containing protein 1 isoform X1 5644 bp XP_018111291 X. laevis.S
XM_018255806 XM_018255806.2 bromodomain-containing protein 1 isoform X2 5254 bp XP_018111295 X. laevis.S
XM_018255807 XM_018255807.2 bromodomain-containing protein 1 isoform X4 3897 bp XP_018111296 X. laevis.S
XM_018255808 XM_018255808.2 bromodomain-containing protein 1 isoform X4 3932 bp XP_018111297 X. laevis.S
XM_018255809 XM_018255809.2 bromodomain-containing protein 1 isoform X5 5148 bp XP_018111298 X. laevis.S
XM_018255810 XM_018255810.2 bromodomain-containing protein 1 isoform X7 3645 bp XP_018111299 X. laevis.S
XM_018255812 XM_018255812.2 bromodomain-containing protein 1 isoform X8 3738 bp XP_018111301 X. laevis.S
XM_041588511 XM_041588511.1 XP_041444445.1 bromodomain-containing protein 1 isoform X1 6043 bp XP_041444445 X. laevis.S
XM_041588512 XM_041588512.1 XP_041444446.1 bromodomain-containing protein 1 isoform X1 5870 bp XP_041444446 X. laevis.S
XM_041588513 XM_041588513.1 XP_041444447.1 bromodomain-containing protein 1 isoform X1 5817 bp XP_041444447 X. laevis.S
XM_041588515 XM_041588515.1 XP_041444449.1 bromodomain-containing protein 1 isoform X3 3958 bp XP_041444449 X. laevis.S
XM_041588516 XM_041588516.1 XP_041444450.1 bromodomain-containing protein 1 isoform X6 3822 bp XP_041444450 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g12732 X. laevis.L
NCBI 10.1 XBXL10_1g16126 X. laevis.S
NCBI 10.0 XBXT10g007807 X. tropicalis
ENSEMBL 10.0 brd1 X. tropicalis
Xenbase 9.2 gene9314 X. laevis.S
Xenbase 9.2 gene16400 X. laevis.L
JGI 9.1 Xelaev18021019m.g X. laevis.S
JGI 9.1 Xelaev18017707m.g X. laevis.L
Xenbase 9.1 gene5363 X. tropicalis
ENSEMBL 9.1 brd1 X. tropicalis
JGI 8.0 Xetrov14014335m.g X. tropicalis
JGI 7.2 Xelaev16002131m.g X. laevis.L
JGI 7.1 Xetro.C01887 X. tropicalis
JGI 6.0 XeXenL6RMv10019972m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014519 X. tropicalis
JGI 4.1 gw1.20.191.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_20000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_20000058 X. tropicalis
JGI 4.1 gw1.20.69.1 X. tropicalis
JGI 4.1 e_gw1.20.69.1 X. tropicalis
JGI 4.1 e_gw1.20.191.1 X. tropicalis
JGI 4.1 e_gw1.20.161.1 X. tropicalis
JGI 4.1 gw1.20.161.1 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA30210 X. laevis.S
NCBI 10.1 XBmRNA23923 X. laevis.L
ENSEMBL 10.0 ENSXETT00000112458 X. tropicalis
ENSEMBL 10.0 ENSXETT00000031780 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067586 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079489 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103198 X. tropicalis
NCBI 10.0 mRNA038679 X. tropicalis
Xenbase 9.2 rna27063 X. laevis.S
Xenbase 9.2 rna47909 X. laevis.L
Xenbase 9.1 rna17375 X. tropicalis
JGI 9.1 Xelaev18021019m X. laevis.S
JGI 9.1 Xelaev18017707m X. laevis.L
ENSEMBL 9.1 ENSXETT00000103198 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079489 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067586 X. tropicalis
ENSEMBL 9.1 ENSXETT00000031780 X. tropicalis
JGI 8.0 Xetrov14014335m X. tropicalis
JGI 7.2 Xelaev16002131m X. laevis.L
JGI 7.1 Xetro.C01887.1 X. tropicalis
JGI 7.1 Xetro.C01887.3 X. tropicalis
JGI 7.1 Xetro.C01887.4 X. tropicalis
JGI 7.1 Xetro.C01887.2 X. tropicalis
JGI 6.0 XeXenL6RMv10019972m X. laevis.L
JGI 4.1 gw1.20.69.1 X. tropicalis
JGI 4.1 gw1.20.191.1 X. tropicalis
JGI 4.1 gw1.20.161.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_20000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_20000058 X. tropicalis
JGI 4.1 e_gw1.20.69.1 X. tropicalis
JGI 4.1 e_gw1.20.191.1 X. tropicalis
JGI 4.1 e_gw1.20.161.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031780 X. tropicalis

mRNAs from cDNA libraries (29)

Clone Accession Species Library Anatomy Stage
IMAGE:7691301 BC121942 X. tropicalis NIH_XGC_tropTe4 testis frog
TGas013b11 CR761625 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas025c12 CU025031 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001079563 X. tropicalis
XM_012959167 X. tropicalis
XM_012959168 X. tropicalis
XM_031897998 X. tropicalis
IMAGE:5515438 BC073421 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001092377 X. laevis.L
XM_018250949 X. laevis.L
XM_018250950 X. laevis.L
XM_018250951 X. laevis.L
XM_018250955 X. laevis.L
XM_041585086 X. laevis.L
XM_018255802 X. laevis.S
XM_018255806 X. laevis.S
XM_018255807 X. laevis.S
XM_018255808 X. laevis.S
XM_018255809 X. laevis.S
XM_018255810 X. laevis.S
XM_018255812 X. laevis.S
XM_041588511 X. laevis.S
XM_041588512 X. laevis.S
XM_041588513 X. laevis.S
XM_041588515 X. laevis.S
XM_041588516 X. laevis.S
XR_005966661 X. laevis.S
XR_005966662 X. laevis.S
XR_005966663 X. laevis.S

ESTs (91)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7691301 CX916330 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6984130 CF153148 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7611994 CX404594 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603293 CX394510 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786698 CX328852 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790935 CX324582 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA077i10 BX728090 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu016f05 AL642843 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu047a22 AL659492 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096k03 AL791396 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu140j18 AL797740 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA052p10 BX724310 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA036p19 CR440000 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011c18 CR410025 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7746957 DN042122 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
st47o21 DC178545 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st97a23 DC191997 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st97c13 DC192023 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st98c13 DC192269 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas008f06 AL628350 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas025c12 AL629733 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas017d01 AL633801 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013b11 AL634294 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029l08 AL646865 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102b01 AL956172 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas101j19 AL956284 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO9479 CX957878 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN10883 CX926258 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CN102073 CN102073 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7531933 CX421831 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CN094783 CN094783 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7542831 CX458152 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548313 CX490370 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8914513 EL826974 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7554127 CX492483 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8929282 EL678522 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7804337 DR839846 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8929282 EL678521 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst47o21 DC148269 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst48o21 DC148520 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst97a23 DC162021 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst97c13 DC162044 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst98a23 DC162267 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst98c13 DC162293 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas102b01 BX753688 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas101j19 BX756835 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7531933 CX421830 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542831 CX458151 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554127 CX492482 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533877 DR888674 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539266 DR888808 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA011c18 CR410026 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA036p19 CR440001 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA077i10 BX728091 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7790935 CX324581 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786698 CX328851 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593955 CX330878 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603293 CX394509 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611994 CX404593 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7691301 CX916329 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN10883 CX926257 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO9479 CX957877 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7746957 DN042121 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8914513 EL826975 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
CN094782 CN094782 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN102072 CN102072 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
XL074j21 BJ061973 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL055b21 BJ069958 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL450l06ex BP686244 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439c09ex BP681905 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0158E06 AW645974 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL418l03ex BP675096 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6632362 BU907242 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4684276 BQ735605 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5515438 CF285834 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL014i08 BJ031756 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3402596 BG363984 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:8643354 EB733855 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
XL496n03ex BP709110 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6863068 CA986646 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0138C02 AW644262 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGp998D218304 BX849135 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL074j20 BJ061972 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL020n15 BJ033461 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL055b21 BJ086998 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL418l03ex BP712595 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3301105 BE491038 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL439c09ex BP718283 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL014i08 BJ046790 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3402596 BG020347 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL450l06ex BP722041 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5