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Summary Expression Phenotypes Gene Literature (9) GO Terms (46) Nucleotides (430) Proteins (56) Interactants (263) Wiki
XB-GENEPAGE-950001

Show:     All X. tropicalis X. laevis

Nucleotide sequences for top1.1 - All

RefSeq mRNAs(3)
Models - Gene (34)
Models - mRNA (44)
mRNAs (9)
ESTs (282)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002932872 XM_002932872.5 DNA topoisomerase 1 4034 bp XP_002932918 X. tropicalis
NM_001090562 NM_001090562.1 DNA topoisomerase 1 4020 bp NP_001084031 X. laevis.L
XM_018234205 XM_018234205.2 DNA topoisomerase 1 isoform X1 4163 bp XP_018089694 X. laevis.L

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g39942 X. laevis.L
NCBI 10.0 XBXT10g006568 X. tropicalis
Xenbase 9.2 gene13390 X. laevis.S
ENSEMBL 10.0 top1.1 X. tropicalis
Xenbase 9.2 gene41557 X. laevis.L
JGI 9.1 Xelaev18043916m.g X. laevis.L
JGI 9.1 Xelaev18004666m.g X. laevis.S
Xenbase 9.1 gene8355 X. tropicalis
ENSEMBL 9.1 top1.1 X. tropicalis
JGI 8.0 Xetrov14040121m.g X. tropicalis
JGI 7.2 Xelaev16055528m.g X. laevis.L
JGI 7.1 Xetro.J00276 X. tropicalis
JGI 6.0 XeXenL6RMv10020925m.g X. laevis.L
JGI 6.0 XeXenL6RMv10017655m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000019415 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_380059 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_38000061 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_380018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_38000019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_380060 X. tropicalis
JGI 4.1 e_gw1.38.168.1 X. tropicalis
JGI 4.1 e_gw1.38.184.1 X. tropicalis
JGI 4.1 e_gw1.38.248.1 X. tropicalis
JGI 4.1 e_gw1.38.314.1 X. tropicalis
JGI 4.1 e_gw1.38.67.1 X. tropicalis
JGI 4.1 gw1.38.168.1 X. tropicalis
JGI 4.1 gw1.38.184.1 X. tropicalis
JGI 4.1 gw1.38.248.1 X. tropicalis
JGI 4.1 gw1.38.314.1 X. tropicalis
JGI 4.1 gw1.38.67.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_380055 X. tropicalis
JGI 4.1 estExt_Genewise1.C_380168 X. tropicalis
JGI 4.1 estExt_Genewise1.C_380248 X. tropicalis
JGI 4.1 estExt_Genewise1.C_380314 X. tropicalis

mRNAs based on gene models(44)

Source Version Model Species
NCBI 10.1 XBmRNA75100 X. laevis.L
ENSEMBL 10.0 ENSXETT00000070565 X. tropicalis
NCBI 10.0 mRNA032477 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095810 X. tropicalis
Xenbase 9.2 rna38955 X. laevis.S
Xenbase 9.2 rna84041 X. laevis.L
ENSEMBL 9.1 ENSXETT00000068535 X. tropicalis
Xenbase 9.1 rna26988 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081730 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081921 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092712 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095810 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104001 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067058 X. tropicalis
JGI 9.1 Xelaev18043916m X. laevis.L
JGI 9.1 Xelaev18004666m X. laevis.S
ENSEMBL 9.1 ENSXETT00000070565 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079241 X. tropicalis
JGI 8.0 Xetrov14040121m X. tropicalis
JGI 7.2 Xelaev16055528m X. laevis.L
JGI 7.1 Xetro.J00276.1 X. tropicalis
JGI 6.0 XeXenL6RMv10020925m X. laevis.L
JGI 6.0 XeXenL6RMv10017655m X. laevis.L
JGI 4.1 gw1.38.168.1 X. tropicalis
JGI 4.1 e_gw1.38.184.1 X. tropicalis
JGI 4.1 e_gw1.38.248.1 X. tropicalis
JGI 4.1 e_gw1.38.314.1 X. tropicalis
JGI 4.1 e_gw1.38.67.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042072 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042074 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_380059 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_380060 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_380018 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_380055 X. tropicalis
JGI 4.1 estExt_Genewise1.C_380168 X. tropicalis
JGI 4.1 estExt_Genewise1.C_380248 X. tropicalis
JGI 4.1 estExt_Genewise1.C_380314 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_38000061 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_38000019 X. tropicalis
JGI 4.1 e_gw1.38.168.1 X. tropicalis
JGI 4.1 gw1.38.184.1 X. tropicalis
JGI 4.1 gw1.38.248.1 X. tropicalis
JGI 4.1 gw1.38.314.1 X. tropicalis
JGI 4.1 gw1.38.67.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
TGas022g22 CR762310 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu043g16 CT485763 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002932872 X. tropicalis
IMAGE:3749339 BC088798 X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:7298526 BC134830 X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:9041579 BC169944 X. laevis.L
L07777 X. laevis.L
NM_001090562 X. laevis.L
XM_018234205 X. laevis.L

ESTs (282)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
xthr16K11 CN099412 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA051i05 CR588885 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053o01 CR582671 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014g01 CR566099 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007n02 CR561151 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA045a04 CR449319 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA001e20 CR447281 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA044a12 CR430316 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA068g12 CR426724 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA029d17 CR411095 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu100k17 AL805733 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126a06 AL803900 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095c14 AL803498 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095m19 AL803379 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu129a11 AL801109 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu128g20 AL799323 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu130m20 AL797925 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122f21 AL792630 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082p13 AL780153 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093n15 AL779271 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058o19 AL679669 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu036j09 AL661550 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu036h21 AL661544 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu040o22 AL660831 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046l06 AL659081 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046k14 AL659002 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043g16 AL658171 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027h02 AL644423 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu016o12 AL642996 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu016n15 AL642893 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu006p13 AL640773 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu020j19 AL635493 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6992503 CF241887 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7516476 CX747771 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7511053 CX740145 5' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:6986281 CF222074 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas035d20 AL654354 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044g20 AL654508 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027k21 AL655292 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas053m02 AL678065 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas070g14 AL680754 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas059h08 AL682824 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas062g21 AL683132 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071j09 AL773732 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114l18 AL956512 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas110a12 AL965785 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136p22 AL972786 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8924995 EL670364 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7757062 DR874580 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8886860 EL844304 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6976791 CF223418 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7752068 DN052162 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7740393 DN030268 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
CAAO8778 CX956590 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs34F17 CN091117 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7798385 DR886669 5' X. tropicalis NIH_XGC_tropMet6 whole organism NF stage 62
IMAGE:7611979 CX404223 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT3598 CX399071 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616112 CX392678 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613948 CX389863 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629768 CX369730 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st34d14 DC173106 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st35d14 DC173370 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st3b01 DC173883 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st6a08 DC174718 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st46k10 DC178243 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st79e19 DC186322 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7528324 CX425264 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529794 CX426930 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7619272 CX346902 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr09H08 CN119182 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7576461 CX431620 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7599716 CX344727 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7576212 CX431866 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7788095 CX332869 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7573349 CX436648 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573547 CX437361 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524965 CX439689 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7592839 CX326581 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7542237 CX449014 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA075f17 BX739494 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7539134 CX452069 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8914746 EL838072 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7539359 CX452300 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:4461216 BG884745 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7540499 CX461863 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540555 CX461917 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541223 CX462543 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541375 CX463222 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas003l06 AL594079 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7562367 CX466030 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas005c22 AL595645 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7562503 CX466634 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas022g22 AL628663 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7520842 CX468739 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas025c02 AL629728 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7521214 CX469320 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563566 CX473979 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535709 CX476605 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5